Evidence map›Paper›PMID 25764541›Full record

ArticleFEMS microbiology ecology2015

Altered gut microbial energy and metabolism in children with non-alcoholic fatty liver disease.

Sonia Michail, Malinda Lin, Mark R Frey, Rob Fanter, Oleg Paliy, Brian Hilbush, Nicholas V Reo

Open access · bronzeAbstract read
In one paragraph

Article in FEMS microbiology ecology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 175 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
175citing papers in PubMed, 4 pooled it
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

175 citing papers in PubMed, 4 syntheses or guidelines pooled it, 330 citations in OpenAlex.

  1. Pooled it
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  3. Intestinal permeability in human nonalcoholic fatty liver disease: A systematic review and meta-analysis.Liver international : official journal of the International Association for the Study of the Liver · 2020
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115 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Sonia MichailDepartment of Pediatrics, Division of Gastroenterology, Hepatology, and Nutrition at Children's Hospital Los Angeles, 4650 Sunset Blvd. MS#78, Los Angeles, CA 90027, USA Keck School of Medicine at the University of Southern California, Los Angeles, CA 90089, USA sonia.michail@hotmail.com.
Malinda LinDepartment of Pediatrics, Division of Gastroenterology, Hepatology, and Nutrition at Children's Hospital Los Angeles, 4650 Sunset Blvd. MS#78, Los Angeles, CA 90027, USA Keck School of Medicine at the University of Southern California, Los Angeles, CA 90089, USA.
Mark R FreyDepartment of Pediatrics, Division of Gastroenterology, Hepatology, and Nutrition at Children's Hospital Los Angeles, 4650 Sunset Blvd. MS#78, Los Angeles, CA 90027, USA Keck School of Medicine at the University of Southern California, Los Angeles, CA 90089, USA.
Rob FanterDepartment of Pediatrics, Division of Gastroenterology, Hepatology, and Nutrition at Children's Hospital Los Angeles, 4650 Sunset Blvd. MS#78, Los Angeles, CA 90027, USA Childrens Hospital Los Angeles Proteomics Core, 4650 Sunset Blvd. MS#78, Los Angeles, CA 90027, USA.
Oleg PaliyDepartment of Biochemistry & Molecular Biology, Boonshoft School of Medicine, Wright State University, 3640 Colonel Glenn Hwy, Dayton, OH 45435, USA.
Brian HilbushReal time Genomics, 999 Bayhill Dr #101, San Bruno, CA 94066, USA.
Nicholas V ReoDepartment of Biochemistry & Molecular Biology, Boonshoft School of Medicine, Wright State University, 3640 Colonel Glenn Hwy, Dayton, OH 45435, USA.
Children's Hospital of Los Angeles · USUniversity of Southern California · USWright State University · US

Funding

The role of the ErbB4 and ErbB3 neuregulin receptors in intestinal epithelial regenerationR01DK095004 · NIDDK · CHILDREN'S HOSPITAL OF LOS ANGELES · PI FREY, MARK R · 2013 to 2022
$3.5M
Modification of Gut Microbial Profile in Children with Ulcerative ColitisR01HD081197 · NICHD · CHILDREN'S HOSPITAL OF LOS ANGELES · PI MICHAIL, SONIA · 2015 to 2019
$2.6M
The Use of VSL#3 in Irritable Bowel Syndrome in ChildrenR21AT003400 · NCCIH · WRIGHT STATE UNIVERSITY · PI MICHAIL, SONIA · 2008 to 2011
$545k
Using Affymetrix Microflora array to study microflora composition in children witR21AT003423 · NCCIH · WRIGHT STATE UNIVERSITY · PI PALIY, OLEG · 2008 to 2009
$395k
Quantitative measurements of intestinal metabolites in healthy and IBS childrenR03HD065575 · NICHD · WRIGHT STATE UNIVERSITY · PI PALIY, OLEG · 2010 to 2011
$143k
NCCIH NIH HHS AT003423NCCIH NIH HHS R21 AT003400NICHD NIH HHS HD065575NICHD NIH HHS R01 HD081197NIDDK NIH HHS R01 DK095004
6 · The paper itself

Abstract

Obesity is becoming the new pediatric epidemic. Non-alcoholic fatty liver disease (NAFLD) is frequently associated with obesity and has become the most common cause of pediatric liver disease. The gut microbiome is the major metabolic organ and determines how calories are processed, serving as a caloric gate and contributing towards the pathogenesis of NAFLD. The goal of this study is to examine gut microbial profiles in children with NAFLD using phylogenetic, metabolomic, metagenomic and proteomic approaches. Fecal samples were obtained from obese children with or without NAFLD and healthy lean children. Stool specimens were subjected to 16S rRNA gene microarray, shotgun sequencing, mass spectroscopy for proteomics and NMR spectroscopy for metabolite analysis. Children with NAFLD had more abundant Gammaproteobacteria and Prevotella and significantly higher levels of ethanol, with differential effects on short chain fatty acids. This group also had increased genomic and protein abundance for energy production with a reduction in carbohydrate and amino acid metabolism and urea cycle and urea transport systems. The metaproteome and metagenome showed similar findings. The gut microbiome in pediatric NAFLD is distinct from lean healthy children with more alcohol production and pathways allocated to energy metabolism over carbohydrate and amino acid metabolism, which would contribute to development of disease.

Indexed as

AdolescentChildEnergy MetabolismEthanolFecesGammaproteobacteriaHumansIntestinesMaleMetagenomeMicrobiotaNon-alcoholic Fatty Liver DiseaseObesityPhylogenyPrevotellaRNA, Ribosomal, 16SEthanolRNA, Ribosomal, 16Scarbohydrateenergy metabolismgut microbiomeNASHobesity

Identifiers

PMID25764541
PMCPMC4358749
OpenAlexW2103563407

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.