Evidence map›Paper›PMID 25764133›Full record

ArticlePloS one2015

Accumulation of squalene in a microalga Chlamydomonas reinhardtii by genetic modification of squalene synthase and squalene epoxidase genes.

Masataka Kajikawa, Seiko Kinohira, Akira Ando, Miki Shimoyama, Misako Kato, Hideya Fukuzawa

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 70 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Expression ofGenes · 2023
    Article
  7. Article
  8. Recent advances in the microbial production of squalene.World journal of microbiology & biotechnology · 2022
    Review
  9. Extraction of Squalene From Tea Leaves (Frontiers in nutrition · 2022
    Article
  10. Article
  11. Strategies for enhancing terpenoids accumulation in microalgae.Applied microbiology and biotechnology · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Masataka KajikawaGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Seiko KinohiraGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Akira AndoGraduate School of Humanities and Science, Ochanomizu University, Tokyo, Japan.
Miki ShimoyamaGraduate School of Humanities and Science, Ochanomizu University, Tokyo, Japan.
Misako KatoGraduate School of Humanities and Science, Ochanomizu University, Tokyo, Japan.
Hideya FukuzawaGraduate School of Biostudies, Kyoto University, Kyoto, Japan.
Kyoto University · JPOchanomizu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several microalgae accumulate high levels of squalene, and as such provide a potentially valuable source of this useful compound. However, the molecular mechanism of squalene biosynthesis in microalgae is still largely unknown. We obtained the sequences of two enzymes involved in squalene synthesis and metabolism, squalene synthase (CrSQS) and squalene epoxidase (CrSQE), from the model green alga Chlamydomonas reinhardtii. CrSQS was functionally characterized by expression in Escherichia coli and CrSQE by complementation of a budding yeast erg1 mutant. Transient expression of CrSQS and CrSQE fused with fluorescent proteins in onion epidermal tissue suggested that both proteins were co-localized in the endoplasmic reticulum. CrSQS-overexpression increased the rate of conversion of 14C-labeled farnesylpyrophosphate into squalene but did not lead to over-accumulation of squalene. Addition of terbinafine caused the accumulation of squalene and suppression of cell survival. On the other hand, in CrSQE-knockdown lines, the expression level of CrSQE was reduced by 59-76% of that in wild-type cells, and significant levels of squalene (0.9-1.1 μg mg-1 cell dry weight) accumulated without any growth inhibition. In co-transformation lines with CrSQS-overexpression and CrSQE-knockdown, the level of squalene was not increased significantly compared with that in solitary CrSQE-knockdown lines. These results indicated that partial knockdown of CrSQE is an effective strategy to increase squalene production in C. reinhardtii cells.

Indexed as

Chlamydomonas reinhardtiiEndoplasmic ReticulumEnzyme InhibitorsFarnesyl-Diphosphate FarnesyltransferaseGene Knockdown TechniquesMutationNaphthalenesRecombinant ProteinsSqualeneSqualene MonooxygenaseSterolsTerbinafineYeastsEnzyme InhibitorsFarnesyl-Diphosphate FarnesyltransferaseNaphthalenesRecombinant ProteinsSqualeneSqualene MonooxygenaseSterolsTerbinafine

Identifiers

PMID25764133
PMCPMC4357444
OpenAlexW1975202218

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.