Evidence map›Paper›PMID 25764112›Full record

ReviewTranscription2014

Single molecule studies of RNA polymerase II transcription in vitro.

Abigail E Horn, James A Goodrich, Jennifer F Kugel

Open access · bronzeAbstract readReview
In one paragraph

Review in Transcription, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Observing Single RNA Polymerase Molecules Down to Base-Pair Resolution.Methods in molecular biology (Clifton, N.J.) · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Abigail E Horna Department of Chemistry and Biochemistry; University of Colorado; Boulder, CO USA.
James A Goodrich
Jennifer F Kugel
University of Colorado System · USUniversity of Colorado Boulder · US

Funding

Predoctoral Training Molecular BiophysicsT32GM065103 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI FALKE, JOSEPH J · 2002 to 2021
$4.3M
NIGMS NIH HHS T32 GM-065103NIGMS NIH HHS T32 GM065103
6 · The paper itself

Abstract

Eukaryotic mRNA transcription by RNA polymerase II (RNAP II) is the first step in gene expression and a key determinant of cellular regulation. Elucidating the mechanism by which RNAP II synthesizes RNA is therefore vital to determining how genes are controlled under diverse biological conditions. Significant advances in understanding RNAP II transcription have been achieved using classical biochemical and structural techniques; however, aspects of the transcription mechanism cannot be assessed using these approaches. The application of single-molecule techniques to study RNAP II transcription has provided new insight only obtainable by studying molecules in this complex system one at a time.

Indexed as

Fluorescence Resonance Energy TransferGene Expression RegulationModels, GeneticNucleosomesOptical TweezersPromoter Regions, GeneticRNA, MessengerRNA Polymerase IITranscription, GeneticNucleosomesRNA, MessengerRNA Polymerase IIfluorescenceFREToptical tweezersRNA polymerase IIsingle-moleculeTIRFtranscription

Identifiers

PMID25764112
PMCPMC4214229
OpenAlexW1969285372

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.