Evidence map›Paper›PMID 25763846›Full record

ArticlePLoS genetics2015

Seizures are regulated by ubiquitin-specific peptidase 9 X-linked (USP9X), a de-ubiquitinase.

Lily Paemka, Vinit B Mahajan, Salleh N Ehaideb, Jessica M Skeie, Men Chee Tan, Shu Wu, Allison J Cox, Levi P Sowers, Jozef Gecz, Lachlan Jolly and 10 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
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  9. Novel Variant in theMolecular syndromology · 2023
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  17. The Ubiquitinated Axon: Local Control of Axon Development and Function by Ubiquitin.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Review
  18. Article
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 3 countries.

Lily PaemkaDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Program in Genetics, The University of Iowa, Iowa City, Iowa, United States of America.
Vinit B MahajanDepartment of Ophthalmology and Visual Sciences, The University of Iowa, Iowa City, Iowa, United States of America; Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City, Iowa, United States of America; Department of Biology, The University of Iowa, Iowa City, Iowa, United States of America.
Salleh N EhaidebDepartment of Biology, The University of Iowa, Iowa City, Iowa, United States of America; King Abdullah International Medical Research Center, King Abdulaziz Medical City, Riyadh, KSA.
Jessica M SkeieDepartment of Ophthalmology and Visual Sciences, The University of Iowa, Iowa City, Iowa, United States of America; Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City, Iowa, United States of America.
Men Chee TanEskitis Institute for Drug Discovery, Griffith University, Brisbane, Australia.
Shu WuDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America.
Allison J CoxDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America; Department of Ophthalmology and Visual Sciences, The University of Iowa, Iowa City, Iowa, United States of America.
Levi P SowersInterdisciplinary Graduate Program of Neuroscience, Department of Veterans Affairs Medical Center, Iowa City, Iowa, United States of America.
Jozef GeczSchool of Paediatrics and Reproductive Health, Robinson Institute, University of Adelaide, Adelaide, South Australia, Australia.
Lachlan JollySchool of Paediatrics and Reproductive Health, Robinson Institute, University of Adelaide, Adelaide, South Australia, Australia.
Polly J FergusonDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America; Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City, Iowa, United States of America.
Benjamin DarbroDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Program in Genetics, The University of Iowa, Iowa City, Iowa, United States of America; Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City, Iowa, United States of America.
Amy SchneiderEpilepsy Research Centre, Department of Medicine, University of Melbourne, The Florey, Austin Health, Heidelberg, Melbourne, Australia.
Ingrid E SchefferEpilepsy Research Centre, Department of Medicine, University of Melbourne, The Florey, Austin Health, Heidelberg, Melbourne, Australia.
Gemma L CarvillDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington, United States of America.
Heather C MeffordDivision of Genetic Medicine, Department of Pediatrics, University of Washington, Seattle, Washington, United States of America.
Hatem El-ShantiDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America; Qatar Biomedical Research Institute Medical Genetics Center, Doha, Qatar.
Stephen A WoodEskitis Institute for Drug Discovery, Griffith University, Brisbane, Australia.
J Robert ManakDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Program in Genetics, The University of Iowa, Iowa City, Iowa, United States of America; Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City, Iowa, United States of America; Department of Biology, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Graduate Program in Molecular and Cellular Biology, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Graduate Program in Neuroscience, The University of Iowa, Iowa City, Iowa, United States of America.
Alexander G BassukDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Program in Genetics, The University of Iowa, Iowa City, Iowa, United States of America; Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Graduate Program in Molecular and Cellular Biology, The University of Iowa, Iowa City, Iowa, United States of America; Interdisciplinary Graduate Program in Neuroscience, The University of Iowa, Iowa City, Iowa, United States of America.
University of Iowa · USAustin Health · AUGriffith University · AUUniversity of Adelaide · AUUniversity of Washington · USKing Abdulaziz Medical City · SA

Funding

Intellectual and Developmental Disabilities Research CenterU54HD083091 · NICHD · UNIVERSITY OF WASHINGTON · PI DOHERTY, DANIEL · 2014 to 2019
$7.9M
PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM008629 · NIGMS · UNIVERSITY OF IOWA · PI EBERL, DANIEL F · 1997 to 2021
$4.1M
Structure and Function of Calpain-5R01EY024665 · NEI · UNIVERSITY OF IOWA · PI MAHAJAN, VINIT B · 2015 to 2019
$1.9M
Evaluating PRICKLE Mutations in Human Epilepsy and in Animal ModelsR01NS064159 · NINDS · UNIVERSITY OF IOWA · PI BASSUK, ALEXANDER G · 2009 to 2013
$1.7M
Wnt modulation as a treatment for Autism Spectrum DisordersR21MH100086 · NIMH · UNIVERSITY OF IOWA · PI BASSUK, ALEXANDER G · 2013 to 2014
$407k
An epigenomic approach to identifying noncoding mutations in epilepsyK99NS089858 · NINDS · UNIVERSITY OF WASHINGTON · PI CARVILL, GEMMA LOUISE · 2014 to 2015
$182k
NEI NIH HHS R01 EY024665NICHD NIH HHS U54 HD083091NIGMS NIH HHS T32 GM008629NIMH NIH HHS R21 MH100086NINDS NIH HHS K99 NS089858NINDS NIH HHS R01 NS064159
6 · The paper itself

Abstract

Epilepsy is a common disabling disease with complex, multifactorial genetic and environmental etiology. The small fraction of epilepsies subject to Mendelian inheritance offers key insight into epilepsy disease mechanisms; and pathologies brought on by mutations in a single gene can point the way to generalizable therapeutic strategies. Mutations in the PRICKLE genes can cause seizures in humans, zebrafish, mice, and flies, suggesting the seizure-suppression pathway is evolutionarily conserved. This pathway has never been targeted for novel anti-seizure treatments. Here, the mammalian PRICKLE-interactome was defined, identifying prickle-interacting proteins that localize to synapses and a novel interacting partner, USP9X, a substrate-specific de-ubiquitinase. PRICKLE and USP9X interact through their carboxy-termini; and USP9X de-ubiquitinates PRICKLE, protecting it from proteasomal degradation. In forebrain neurons of mice, USP9X deficiency reduced levels of Prickle2 protein. Genetic analysis suggests the same pathway regulates Prickle-mediated seizures. The seizure phenotype was suppressed in prickle mutant flies by the small-molecule USP9X inhibitor, Degrasyn/WP1130, or by reducing the dose of fat facets a USP9X orthologue. USP9X mutations were identified by resequencing a cohort of patients with epileptic encephalopathy, one patient harbored a de novo missense mutation and another a novel coding mutation. Both USP9X variants were outside the PRICKLE-interacting domain. These findings demonstrate that USP9X inhibition can suppress prickle-mediated seizure activity, and that USP9X variants may predispose to seizures. These studies point to a new target for anti-seizure therapy and illustrate the translational power of studying diseases in species across the evolutionary spectrum.

Indexed as

AnimalsDrosophila melanogasterHumansMass SpectrometryMiceSeizuresUbiquitin ThiolesteraseUbiquitin ThiolesteraseUSP9X protein, human

Identifiers

PMID25763846
PMCPMC4357451
OpenAlexW2018394697

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.