Evidence map›Paper›PMID 25763615›Full record

ArticlePlant signaling & behavior2014

Light-sensitive Phytochrome-Interacting Factors (PIFs) are not required to regulate phytoene synthase gene expression in the root.

M Águila Ruiz-Sola, Antía Rodríguez-Villalón, Manuel Rodríguez-Concepción

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. PutativePlants (Basel, Switzerland) · 2023
    Article
  3. Overexpression ofFrontiers in plant science · 2022
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

M Águila Ruiz-Solaa Centre for Research in Agricultural Genomics (CRAG) CSIC-IRTA-UAB-UB; Campus UAB Bellaterra; Barcelona, Spain.
Antía Rodríguez-Villalón
Manuel Rodríguez-Concepción
Center for Research in Agricultural Genomics · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Carotenoids are plastidial isoprenoids essential for the protection of photosynthetic tissues against excess light. They also serve as precursors of apocarotenoid hormones such as abscisic acid (ABA) and strigolactones. The first enzyme of the carotenoid pathway, phytoene synthase (PSY), is also the main rate-limiting step. Unlike that observed in most plants, PSY is encoded by a single gene in Arabidopsis thaliana. Whereas the PSY gene is induced by light in photosynthetic tissues, a root-specific upregulation of PSY expression by salt stress and ABA has been recently demonstrated. Here we report that transcription factors of the Phytochrome-Interacting Factor (PIF) family, previously shown to repress PSY expression in etiolated seedlings and mature leaves, do not influence PSY expression in roots. Together, our results suggest that organ-specific pathways regulate PSY expression and hence carotenoid production in response to different environmental cues.

Indexed as

Gene Expression Regulation, PlantLightAbscisic AcidArabidopsisArabidopsis ProteinsCarotenoidsEnvironmentGene ExpressionGenes, PlantGeranylgeranyl-Diphosphate GeranylgeranyltransferasePhytochromePlant RootsSalt ToleranceSodium ChlorideStress, PhysiologicalTranscription FactorsAbscisic Acid(all-E) phytoeneArabidopsis ProteinsCarotenoidsGeranylgeranyl-Diphosphate GeranylgeranyltransferasePhytochromeSodium ChlorideTranscription FactorsArabidopsiscarotenoiddarkphytoene synthasePIFrootsalt

Identifiers

PMID25763615
PMCPMC4203534
OpenAlexW1998059111

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.