Evidence map›Paper›PMID 25763067›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2014

Efficient assembly of full-length infectious clone of Brazilian IBDV isolate by homologous recombination in yeast.

J V J Silva, S Arenhart, H F Santos, S R Almeida-Queiroz, A N M R Silva, I M Trevisol, G R Bertani, L H V G Gil

Open access · hybridAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Use of homologous recombination in yeast to create chimeric bovine viral diarrhea virus cDNA clones.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

J V J SilvaDepartamento de Virologia e Terapia Experimental Centro de Pesquisas Aggeu Magalhães Fundação Oswaldo Cruz RecifePE Brazil Departamento de Virologia e Terapia Experimental, Centro de Pesquisas Aggeu Magalhães, Fundação Oswaldo Cruz, Recife, PE, Brazil.
S ArenhartDepartamento de Virologia e Terapia Experimental Centro de Pesquisas Aggeu Magalhães Fundação Oswaldo Cruz RecifePE Brazil Departamento de Virologia e Terapia Experimental, Centro de Pesquisas Aggeu Magalhães, Fundação Oswaldo Cruz, Recife, PE, Brazil. ; Setor de Virologia, Departamento de Medicina Veterinária Preventiva Centro de Ciências Rurais Universidade Federal de Santa Maria Santa MariaRS Brazil Setor de Virologia, Departamento de Medicina Veterinária Preventiva, Centro de Ciências Rurais, Universidade Federal de Santa Maria, Santa Maria, RS, Brazil.
H F SantosLaboratório de Virologia, Departamento de Microbiologia Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde Universidade Federal do Rio Grande do Sul Porto AlegreRS Brazil Laboratório de Virologia, Departamento de Microbiologia, Imunologia e Parasitologia, Instituto de Ciências Básicas da Saúde, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, Brazil.
S R Almeida-QueirozDepartamento de Virologia e Terapia Experimental Centro de Pesquisas Aggeu Magalhães Fundação Oswaldo Cruz RecifePE Brazil Departamento de Virologia e Terapia Experimental, Centro de Pesquisas Aggeu Magalhães, Fundação Oswaldo Cruz, Recife, PE, Brazil.
A N M R SilvaDepartamento de Virologia e Terapia Experimental Centro de Pesquisas Aggeu Magalhães Fundação Oswaldo Cruz RecifePE Brazil Departamento de Virologia e Terapia Experimental, Centro de Pesquisas Aggeu Magalhães, Fundação Oswaldo Cruz, Recife, PE, Brazil.
I M TrevisolEmbrapa Suínos e Aves ConcórdiaSC Brazil Embrapa Suínos e Aves, Concórdia, SC, Brazil.
G R BertaniDepartamento de Bioquímica e Laboratório de Imunopatologia Keiso Asami Universidade Federal de Pernambuco RecifePE Brazil Departamento de Bioquímica e Laboratório de Imunopatologia Keiso Asami, Universidade Federal de Pernambuco, Recife, PE, Brazil.
L H V G GilDepartamento de Virologia e Terapia Experimental Centro de Pesquisas Aggeu Magalhães Fundação Oswaldo Cruz RecifePE Brazil Departamento de Virologia e Terapia Experimental, Centro de Pesquisas Aggeu Magalhães, Fundação Oswaldo Cruz, Recife, PE, Brazil.
Fundação Oswaldo Cruz · BRUniversidade Federal de Santa Maria · BRUniversidade Federal do Rio Grande do Sul · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Infectious Bursal Disease Virus (IBDV) causes immunosuppression in young chickens. Advances in molecular virology and vaccines for IBDV have been achieved by viral reverse genetics (VRG). VRG for IBDV has undergone changes over time, however all strategies used to generate particles of IBDV involves multiple rounds of amplification and need of in vitro ligation and restriction sites. The aim of this research was to build the world's first VRG for IBDV by yeast-based homologous recombination; a more efficient, robust and simple process than cloning by in vitro ligation. The wild type IBDV (Wt-IBDV-Br) was isolated in Brazil and had its genome cloned in pJG-CMV-HDR vector by yeast-based homologous recombination. The clones were transfected into chicken embryo fibroblasts and the recovered virus (IC-IBDV-Br) showed genetic stability and similar phenotype to Wt-IBDV-Br, which were observed by nucleotide sequence, focus size/morphology and replication kinetics, respectively. Thus, IBDV reverse genetics by yeast-based homologous recombination provides tools to IBDV understanding and vaccines/viral vectors development.

Indexed as

Homologous RecombinationAnimalsBrazilCells, CulturedChick EmbryoFibroblastsGenetic VectorsGenomic InstabilityInfectious bursal disease virusReverse GeneticsSaccharomyces cerevisiaeTransfectionVirus CultivationVirus Replicationinfectious bursal disease virusreverse geneticsyeast-based homologous recombination

Identifiers

PMID25763067
PMCPMC4323336
OpenAlexW2078662474

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.