Evidence map›Paper›PMID 25762983›Full record

ArticleFrontiers in microbiology2015

Host response during Yersinia pestis infection of human bronchial epithelial cells involves negative regulation of autophagy and suggests a modulation of survival-related and cellular growth pathways.

Farhang Alem, Kuan Yao, Douglas Lane, Valerie Calvert, Emanuel F Petricoin, Liana Kramer, Martha L Hale, Sina Bavari, Rekha G Panchal, Ramin M Hakami

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Anti-infective compounds forSustainable microbiology · 2026
    Review
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  4. The Messenger Apps of the cell: Extracellular Vesicles as Regulatory Messengers of Microglial Function in the CNS.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2020
    Review
  5. Review
  6. Article
  7. Article
  8. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Farhang AlemNational Center for Biodefense and Infectious Diseases and School of Systems Biology, George Mason University Manassas, VA, USA.
Kuan YaoNational Center for Biodefense and Infectious Diseases and School of Systems Biology, George Mason University Manassas, VA, USA.
Douglas LaneU.S. Army Medical Research Institute of Infectious Diseases Frederick, MD, USA.
Valerie CalvertCenter for Applied Proteomics and Molecular Medicine, School of Systems Biology, George Mason University Manassas, VA, USA.
Emanuel F PetricoinCenter for Applied Proteomics and Molecular Medicine, School of Systems Biology, George Mason University Manassas, VA, USA.
Liana KramerNational Center for Biodefense and Infectious Diseases and School of Systems Biology, George Mason University Manassas, VA, USA.
Martha L HaleU.S. Army Medical Research Institute of Infectious Diseases Frederick, MD, USA.
Sina BavariU.S. Army Medical Research Institute of Infectious Diseases Frederick, MD, USA.
Rekha G PanchalU.S. Army Medical Research Institute of Infectious Diseases Frederick, MD, USA.
Ramin M HakamiNational Center for Biodefense and Infectious Diseases and School of Systems Biology, George Mason University Manassas, VA, USA.
George Mason University · USUnited States Army Medical Research Institute of Infectious Diseases · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yersinia pestis (Yp) causes the re-emerging disease plague, and is classified by the CDC and NIAID as a highest priority (Category A) pathogen. Currently, there is no approved human vaccine available and advances in early diagnostics and effective therapeutics are urgently needed. A deep understanding of the mechanisms of host response to Yp infection can significantly advance these three areas. We employed the Reverse Phase Protein Microarray (RPMA) technology to reveal the dynamic states of either protein level changes or phosphorylation changes associated with kinase-driven signaling pathways during host cell response to Yp infection. RPMA allowed quantitative profiling of changes in the intracellular communication network of human lung epithelial cells at different times post infection and in response to different treatment conditions, which included infection with the virulent Yp strain CO92, infection with a derivative avirulent strain CO92 (Pgm-, Pst-), treatment with heat inactivated CO92, and treatment with LPS. Responses to a total of 111 validated antibodies were profiled, leading to discovery of 12 novel protein hits. The RPMA analysis also identified several protein hits previously reported in the context of Yp infection. Furthermore, the results validated several proteins previously reported in the context of infection with other Yersinia species or implicated for potential relevance through recombinant protein and cell transfection studies. The RPMA results point to strong modulation of survival/apoptosis and cell growth pathways during early host response and also suggest a model of negative regulation of the autophagy pathway. We find significant cytoplasmic localization of p53 and reduced LC3-I to LC3-II conversion in response to Yp infection, consistent with negative regulation of autophagy. These studies allow for a deeper understanding of the pathogenesis mechanisms and the discovery of innovative approaches for prevention, early diagnosis, and treatment of plague.

Indexed as

apoptosis and autophagycell growthhost responsephosphorylation changesproteomicsRPMAsignaling pathwaysYersinia pestis

Identifiers

PMID25762983
PMCPMC4327736
OpenAlexW2158850459

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.