Evidence map›Paper›PMID 25762766›Full record

ArticleJournal of clinical microbiology2015

Multicenter evaluation of Candida QuickFISH BC for identification of Candida species directly from blood culture bottles.

Ayman M Abdelhamed, Sean X Zhang, Tonya Watkins, Margie A Morgan, Fann Wu, Rebecca J Buckner, DeAnna D Fuller, Thomas E Davis, Hossein Salimnia, Marilynn R Fairfax and 4 more

Abstract readEvaluation StudyMulticenter Study
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Diagnostic Molecular Microbiology: A 2018 Snapshot.Clinics in laboratory medicine · 2018
    Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Ayman M AbdelhamedCase Western Reserve University and University Hospitals Case Medical Center, Cleveland, Ohio, USA.
Sean X ZhangThe Johns Hopkins Hospital and The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Tonya WatkinsThe Johns Hopkins Hospital and The Johns Hopkins University School of Medicine, Baltimore, Maryland, USA.
Margie A MorganCedars Sinai Medical Center, Los Angeles, California, USA.
Fann WuColumbia University Medical Center, New York, New York, USA.
Rebecca J BucknerIndiana University School of Medicine, Indianapolis, Indiana, USA.
DeAnna D FullerIndiana University School of Medicine, Indianapolis, Indiana, USA.
Thomas E DavisIndiana University School of Medicine, Indianapolis, Indiana, USA.
Hossein SalimniaWayne State University School of Medicine and Detroit Medical Center University Laboratory, Detroit, Michigan, USA.
Marilynn R FairfaxWayne State University School of Medicine and Detroit Medical Center University Laboratory, Detroit, Michigan, USA.
Paul R LephartWayne State University School of Medicine and Detroit Medical Center University Laboratory, Detroit, Michigan, USA.
Melinda D PoulterUniversity of Virginia Health System, Charlottesville, Virginia, USA.
Sarah B RegiUniversity of Virginia Health System, Charlottesville, Virginia, USA.
Michael R JacobsCase Western Reserve University and University Hospitals Case Medical Center, Cleveland, Ohio, USA mrj6@cwru.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Candida species are common causes of bloodstream infections (BSI), with high mortality. Four species cause >90% of Candida BSI: C. albicans, C. glabrata, C. parapsilosis, and C. tropicalis. Differentiation of Candida spp. is important because of differences in virulence and antimicrobial susceptibility. Candida QuickFISH BC, a multicolor, qualitative nucleic acid hybridization assay for the identification of C. albicans (green fluorescence), C. glabrata (red fluorescence), and C. parapsilosis (yellow fluorescence), was tested on Bactec and BacT/Alert blood culture bottles which signaled positive on automated blood culture devices and were positive for yeast by Gram stain at seven study sites. The results were compared to conventional identification. A total of 419 yeast-positive blood culture bottles were studied, consisting of 258 clinical samples (89 C. glabrata, 79 C. albicans, 23 C. parapsilosis, 18 C. tropicalis, and 49 other species) and 161 contrived samples inoculated with clinical isolates (40 C. glabrata, 46 C. albicans, 36 C. parapsilosis, 19 C. tropicalis, and 20 other species). A total of 415 samples contained a single fungal species, with C. glabrata (n = 129; 30.8%) being the most common isolate, followed by C. albicans (n = 125; 29.8%), C. parapsilosis (n = 59; 14.1%), C. tropicalis (n = 37; 8.8%), and C. krusei (n = 17; 4.1%). The overall agreement (with range for the three major Candida species) between the two methods was 99.3% (98.3 to 100%), with a sensitivity of 99.7% (98.3 to 100%) and a specificity of 98.0% (99.4 to 100%). This study showed that Candida QuickFISH BC is a rapid and accurate method for identifying C. albicans, C. glabrata, and C. parapsilosis, the three most common Candida species causing BSI, directly from blood culture bottles.

Indexed as

BloodCandidaCandidemiaHumansIn Situ Hybridization, FluorescenceMicrobiological TechniquesMolecular Diagnostic TechniquesSensitivity and Specificity

Identifiers

PMID25762766
PMCPMC4400752

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.