Evidence map›Paper›PMID 25762720›Full record

ArticleThe Journal of biological chemistry2015

Phosphorylation of Sae2 Mediates Forkhead-associated (FHA) Domain-specific Interaction and Regulates Its DNA Repair Function.

Jason Liang, Raymond T Suhandynata, Huilin Zhou

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
  5. Article
  6. Mechanism and Control of Meiotic DNA Double-Strand Break Formation inFrontiers in cell and developmental biology · 2021
    Review
  7. DNA damage checkpoint and repair: From the budding yeastComputational and structural biotechnology journal · 2021
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Sae2 antagonizes Rad9 accumulation at DNA double-strand breaks to attenuate checkpoint signaling and facilitate end resection.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  14. Review
  15. Article
  16. Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jason LiangFrom the Ludwig Institute for Cancer Research, Department of Chemistry and Biochemistry.
Raymond T SuhandynataFrom the Ludwig Institute for Cancer Research.
Huilin ZhouFrom the Ludwig Institute for Cancer Research, Department of Chemistry and Biochemistry, Department of Cellular and Molecular Medicine, and Moores Cancer Center, University of California at San Diego, La Jolla, California 92093 huzhou@ucsd.edu.
Ludwig Cancer Research · US

Funding

Contemporary Approaches to Cancer Cell Signaling and CommunicationT32CA009523 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DONOGHUE, DANIEL J, YANG, JING · 1985 to 2025
$12.1M
Regulation and functions of DNA damage checkpoint kinases in YeastR01GM080469 · NIGMS · LUDWIG INSTITUTE FOR CANCER RES LTD · PI ZHOU, HUILIN · 2007 to 2011
$1.4M
NCI NIH HHS T32 CA009523NIGMS NIH HHS GM080469NIGMS NIH HHS R01 GM080469
6 · The paper itself

Abstract

Saccharomyces cerevisiae Sae2 and its ortholog CtIP in higher eukaryotes have a conserved role in the initial processing of DNA lesions and influencing their subsequent repair pathways. Sae2 is phosphorylated by the ATR/ATM family kinases Mec1 and Tel1 in response to DNA damage. Among the Mec1/Tel1 consensus phosphorylation sites of Sae2, we found that mutations of Thr-90 and Thr-279 of Sae2 into alanine caused a persistent Rad53 activation in response to a transient DNA damage, similar to the loss of Sae2. To gain insight into the function of this phosphorylation of Sae2, we performed a quantitative proteomics analysis to identify its associated proteins. We found that phosphorylation of Thr-90 of Sae2 mediates its interaction with Rad53, Dun1, Xrs2, Dma1, and Dma2, whereas Rad53 and Dun1 additionally interact with phosphorylated Thr-279 of Sae2. Mutations of the ligand-binding residues of Forkhead-associated (FHA) domains of Rad53, Dun1, Xrs2, Dma1, and Dma2 abolished their interactions with Sae2, revealing the involvement of FHA-specific interactions. Mutations of Thr-90 and Thr-279 of Sae2 caused a synergistic defect when combined with sgs1Δ and exo1Δ and elevated gross chromosomal rearrangements. Likewise, mutations of RAD53 and DUN1 caused a synthetic growth defect with sgs1Δ and elevated gross chromosomal rearrangements. These findings suggest that threonine-specific phosphorylation of Sae2 by Mec1 and Tel1 contributes to DNA repair and genome maintenance via its interactions with Rad53 and Dun1.

Indexed as

Amino Acid SequenceCatalytic DomainCell Cycle ProteinsCheckpoint Kinase 2DNA RepairEndonucleasesExodeoxyribonucleasesGenes, FungalIntracellular Signaling Peptides and ProteinsMethyl MethanesulfonateMolecular Sequence DataMutagenesis, Site-DirectedMutagensPhosphorylationProtein Interaction Domains and MotifsProtein Serine-Threonine KinasesCell Cycle ProteinsCheckpoint Kinase 2DUN1 protein, S cerevisiaeEndonucleasesexodeoxyribonuclease IExodeoxyribonucleasesIntracellular Signaling Peptides and ProteinsMEC1 protein, S cerevisiaeMethyl MethanesulfonateMutagensProtein Serine-Threonine KinasesRAD53 protein, S cerevisiaeRecQ HelicasesSaccharomyces cerevisiae ProteinsSAE2 protein, S cerevisiaeSGS1 protein, S cerevisiaeTEL1 protein, S cerevisiaeThreonineCheckpoint ControlDNA Damage ResponseDNA RepairDun1FHA DomainsProtein PhosphorylationProtein-Protein InteractionRad53Sae2Xrs2

Identifiers

PMID25762720
PMCPMC4409241
OpenAlexW1967186290

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.