Evidence map›Paper›PMID 25762137›Full record

ArticleNature2015

Visualizing transient Watson-Crick-like mispairs in DNA and RNA duplexes.

Isaac J Kimsey, Katja Petzold, Bharathwaj Sathyamoorthy, Zachary W Stein, Hashim M Al-Hashimi

Open access · greenAbstract read
In one paragraph

Article in Nature, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 130 papers.

0numbers the graph read from it
0cells of the map it votes in
130citing papers in PubMed
15.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

130 citing papers in PubMed, 270 citations in OpenAlex.

  1. Translation fidelity mechanisms and their changes in aging.bioRxiv : the preprint server for biology · 2026
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  5. Nature communications · 2026
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70 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Isaac J KimseyDepartment of Biochemistry and Chemistry, Duke University Medical Center, Durham, North Carolina 27710, USA.
Katja PetzoldDepartment of Medical Biochemistry and Biophysics, Karolinska Institute, SE-171 77 Stockholm, Sweden.
Bharathwaj SathyamoorthyDepartment of Biochemistry and Chemistry, Duke University Medical Center, Durham, North Carolina 27710, USA.
Zachary W SteinBiophysics, University of Michigan, Ann Arbor, Michigan 48109, USA.
Hashim M Al-HashimiDepartment of Biochemistry and Chemistry, Duke University Medical Center, Durham, North Carolina 27710, USA.
Karolinska Institutet · SE

Funding

Role of DNA structural dynamics in mutagenesis and oncogenesisR01GM089846 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Hashim M Al-Hashimi · 2010 to 2026
$5.2M
NIGMS NIH HHS R01 GM089846NIGMS NIH HHS R01GM089846
6 · The paper itself

Abstract

Rare tautomeric and anionic nucleobases are believed to have fundamental biological roles, but their prevalence and functional importance has remained elusive because they exist transiently, in low abundance, and involve subtle movements of protons that are difficult to visualize. Using NMR relaxation dispersion, we show here that wobble dG•dT and rG•rU mispairs in DNA and RNA duplexes exist in dynamic equilibrium with short-lived, low-populated Watson-Crick-like mispairs that are stabilized by rare enolic or anionic bases. These mispairs can evade Watson-Crick fidelity checkpoints and form with probabilities (10(-3) to 10(-5)) that strongly imply a universal role in replication and translation errors. Our results indicate that rare tautomeric and anionic bases are widespread in nucleic acids, expanding their structural and functional complexity beyond that attainable with canonical bases.

Indexed as

Base PairingBase SequenceDNADNA FingerprintingHydrogen BondingHydrogen-Ion ConcentrationMagnetic Resonance SpectroscopyMutationNucleic Acid HeteroduplexesProbabilityRNADNANucleic Acid HeteroduplexesRNA

Identifiers

PMID25762137
PMCPMC4547696
OpenAlexW2066558081

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.