Evidence map›Paper›PMID 25761998›Full record

ArticleBMC biology2015

Distinct genetic architecture underlies the emergence of sleep loss and prey-seeking behavior in the Mexican cavefish.

Masato Yoshizawa, Beatriz G Robinson, Erik R Duboué, Pavel Masek, James B Jaggard, Kelly E O'Quin, Richard L Borowsky, William R Jeffery, Alex C Keene

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
16.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 136 citations in OpenAlex.

  1. Automated Profiling of Social Behaviors to Assess the Genetic Basis of Evolution of Aggressive Behaviors in Astyanax mexicanus.Journal of experimental zoology. Part A, Ecological and integrative physiology · 2026
    Article
  2. Article
  3. Novel mechanisms of chemosensory adaptation to the cave environment.bioRxiv : the preprint server for biology · 2026
    Article
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  12. Postprandial Sleep in Short-Sleeping Mexican Cavefish.Journal of experimental zoology. Part A, Ecological and integrative physiology · 2024
    Article
  13. Article
  14. Postprandial sleep in short-sleeping Mexican cavefish.bioRxiv : the preprint server for biology · 2024
    Article
  15. Phylogenetic conservation of the interdependent homeostatic relationship of sleep regulation and redox metabolism.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2024
    Review
  16. Review
  17. Ontogeny and social context regulate the circadian activity patterns of Lake Malawi cichlids.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2024
    Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Masato YoshizawaDepartment of Biology, University of Nevada, Reno, Reno, NV, 89557, USA. yoshizaw@hawaii.edu.
Beatriz G RobinsonDepartment of Biology, University of Nevada, Reno, Reno, NV, 89557, USA. beatrizrobinson93@gmail.com.
Erik R DubouéDepartment of Biology, New York University, New York, NY, 10012, USA. duboue@ciwemb.edu.
Pavel MasekDepartment of Biology, University of Nevada, Reno, Reno, NV, 89557, USA. pmasek@unr.edu.
James B JaggardDepartment of Biology, University of Nevada, Reno, Reno, NV, 89557, USA. jbrianjaggard@gmail.com.
Kelly E O'QuinDepartment of Biology, Centre College, Danville, KY, 40422, USA. kellyoquin@gmail.com.
Richard L BorowskyDepartment of Biology, New York University, New York, NY, 10012, USA. rb4@nyu.edu.
William R JefferyDepartment of Biology, University of Maryland, College Park, MD, 20742, USA. Jeffery@umd.edu.
Alex C KeeneDepartment of Biology, University of Nevada, Reno, Reno, NV, 89557, USA. akeene@unr.edu.
University of Nevada, Reno · USNew York University · USCentre College · USUniversity of Maryland, College Park · US

Funding

Outreach/Diversity/Pipeline ProjectP20GM103440 · NIGMS · UNIVERSITY OF NEVADA RENO · PI Eduardo A Robleto · 2012 to 2026
$58.0M
Regulation of Eye Growth and Development by the LensR01EY014619 · NEI · UNIV OF MARYLAND, COLLEGE PARK · PI JEFFERY, WILLIAM R · 2003 to 2012
$3.8M
Molecular Genetic Analysis of Sclera Development and DegenerationR01EY024941 · NEI · UNIV OF MARYLAND, COLLEGE PARK · PI JEFFERY, WILLIAM R · 2015 to 2019
$1.9M
NEI NIH HHS R01 EY014619NEI NIH HHS R01-EY014619NEI NIH HHS R01 EY024941NIGMS NIH HHS P20 GM103440NIGMS NIH HHS P20GM103440
6 · The paper itself

Abstract

backgroundSleep is characterized by extended periods of quiescence and reduced responsiveness to sensory stimuli. Animals ranging from insects to mammals adapt to environments with limited food by suppressing sleep and enhancing their response to food cues, yet little is known about the genetic and evolutionary relationship between these processes. The blind Mexican cavefish, Astyanax mexicanus is a powerful model for elucidating the genetic mechanisms underlying behavioral evolution. A. mexicanus comprises an extant ancestral-type surface dwelling morph and at least five independently evolved cave populations. Evolutionary convergence on sleep loss and vibration attraction behavior, which is involved in prey seeking, have been documented in cavefish raising the possibility that enhanced sensory responsiveness underlies changes in sleep.

resultsWe established a system to study sleep and vibration attraction behavior in adult A. mexicanus and used high coverage quantitative trait loci (QTL) mapping to investigate the functional and evolutionary relationship between these traits. Analysis of surface-cave F2 hybrid fish and an outbred cave population indicates that independent genetic factors underlie changes in sleep/locomotor activity and vibration attraction behavior. High-coverage QTL mapping with genotyping-by-sequencing technology identify two novel QTL intervals that associate with locomotor activity and include the narcolepsy-associated tp53 regulating kinase. These QTLs represent the first genomic localization of locomotor activity in cavefish and are distinct from two QTLs previously identified as associating with vibration attraction behavior.

conclusionsTaken together, these results localize genomic regions underlying sleep/locomotor and sensory changes in cavefish populations and provide evidence that sleep loss evolved independently from enhanced sensory responsiveness.

Indexed as

CavesAnimalsBiological EvolutionCharacidaeCrosses, GeneticFemaleHybridization, GeneticLocomotionMaleMexicoPredatory BehaviorQuantitative Trait LociSleepSleep DeprivationVibration

Identifiers

PMID25761998
PMCPMC4364459
OpenAlexW2057785874

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.