ArticleScientific reports2015
The location and translocation of ndh genes of chloroplast origin in the Orchidaceae family.
Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 113 papers.
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Who cites it
113 citing papers in PubMed, 193 citations in OpenAlex.
- Phylotranscriptomics Allows Distinguishing Major Gene Flow Events from Incomplete Lineage Sorting in Rapidly Diversifying Mimetic Orchids (Genus Ophrys).Genome biology and evolution · 2026Article
- Comparative plastid genomics of Gastrochilus (Orchidaceae) with insights into molecular markers and phylogeny.BMC genomics · 2026Article
- Comparative analysis of six new chloroplast genomes in Platanthera (Orchidaceae) enhances understanding of its diversification.Scientific reports · 2026Article
- Complete Chloroplast Genome of theEcology and evolution · 2026Article
- Chloroplast genomes provide new insights into the phylogeny and evolution of the genus Hibiscus L.BMC plant biology · 2026Article
- First Plastome Sequences of Two Endemic Taxa ofBiology · 2026Article
- Repeated loss of plastid NDH during evolution of land plants.Annals of botany · 2026Review
- The multichromosomal structure evolution ofFrontiers in plant science · 2026Article
- Comprehensive species sampling reveals pervasive pseudogenization and recurrent complete loss of plastid ndh genes in the genus Cymbidium (Orchidaceae).BMC plant biology · 2025Article
- Comparative chloroplast genome of six species in Hypoxidaceae from China: insights into phylogenetic relationships and molecular marker development.BMC plant biology · 2025Article
- Comparative analysis of 18 chloroplast genomes reveals genomic diversity and evolutionary dynamics in subtribe Malaxidinae (Orchidaceae).BMC plant biology · 2025Article
- Article
- Plastome and transcriptome analysis reveals a degenerated photosynthesis-related pathway in the mycoheterotrophic vanilloid orchid Cyrtosia lindleyana.BMC plant biology · 2025Article
- Complete chloroplast genome of two Brachycorythis (Orchidaceae) species from China: comparative analysis and phylogenetic implications.BMC genomics · 2025Article
- The complete chloroplast genome sequences of three Cypripedium species and their phylogenetic analysis.Scientific reports · 2025Article
- Plastome evolution in Santalales involves relaxed selection prior to loss of ndh genes and major boundary shifts of the inverted repeat.Annals of botany · 2025Article
- Elucidating the evolutionary dynamics of parasitism in Cuscuta: in-depth phylogenetic reconstruction and extensive plastomes reduction.BMC genomics · 2025Article
- Complete chloroplast genome of eight Phaius (Orchidaceae) species from China: comparative analysis and phylogenetic relationship.BMC plant biology · 2025Article
- Rapid loss of plastidFrontiers in plant science · 2025Article
- Comparative chloroplast genomics of Cypripedioideae: structural divergence, adaptive evolution, and phylogenomic insights.Frontiers in plant science · 2025Article
53 more citing papers are in PubMed but not listed here.
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Authors and funding
17 authors at 7 institutions in 3 countries.
Funding
Abstract
The NAD(P)H dehydrogenase complex is encoded by 11 ndh genes in plant chloroplast (cp) genomes. However, ndh genes are truncated or deleted in some autotrophic Epidendroideae orchid cp genomes. To determine the evolutionary timing of the gene deletions and the genomic locations of the various ndh genes in orchids, the cp genomes of Vanilla planifolia, Paphiopedilum armeniacum, Paphiopedilum niveum, Cypripedium formosanum, Habenaria longidenticulata, Goodyera fumata and Masdevallia picturata were sequenced; these genomes represent Vanilloideae, Cypripedioideae, Orchidoideae and Epidendroideae subfamilies. Four orchid cp genome sequences were found to contain a complete set of ndh genes. In other genomes, ndh deletions did not correlate to known taxonomic or evolutionary relationships and deletions occurred independently after the orchid family split into different subfamilies. In orchids lacking cp encoded ndh genes, non cp localized ndh sequences were identified. In Erycina pusilla, at least 10 truncated ndh gene fragments were found transferred to the mitochondrial (mt) genome. The phenomenon of orchid ndh transfer to the mt genome existed in ndh-deleted orchids and also in ndh containing species.
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