ArticleBMC genomics2015
Genome-wide survey and expression analysis of F-box genes in chickpea.
Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
38 citing papers in PubMed, 90 citations in OpenAlex.
- Identification and analysis of salt-responsive F-box genes in upland cotton and the potential role of GhFBX83 in salt stress tolerance through regulating ROS homeostasis.BMC plant biology · 2026Article
- Genome-wide identification and expression analysis of JmjC domain-containing family in Vitis vinifera L.BMC genomics · 2025Article
- Genome-wide identification of F-box-LRR gene family and the functional analysis of CsFBXL13 transcription factor in tea plants.Functional & integrative genomics · 2025Article
- How the Ectopic Expression of the BarleyInternational journal of molecular sciences · 2025Article
- Genome-wide Association Studies of Photosynthetic and Agronomic Traits in Cowpea Collection.G3 (Bethesda, Md.) · 2024Article
- Deciphering the mechanism of E3 ubiquitin ligases in plant responses to abiotic and biotic stresses and perspectives on PROTACs for crop resistance.Plant biotechnology journal · 2024Review
- The Identification and Expression Analysis of thePlants (Basel, Switzerland) · 2024Article
- Physiological and molecular characteristics associated with the anti-senescence inPhotosynthetica · 2024Article
- Characterization of the F-Box Gene Family and Its Expression under Osmotic Stress in Birch.Plants (Basel, Switzerland) · 2023Article
- Role of F-box E3-ubiquitin ligases in plant development and stress responses.Plant cell reports · 2023Review
- Insights of auxin signaling F-box genes in wheat (Triticum aestivum L.) and their dynamic expression during the leaf rust infection.Protoplasma · 2023Article
- Genome-Wide Analysis of the FBA Subfamily of the Poplar F-Box Gene Family and Its Role under Drought Stress.International journal of molecular sciences · 2023Article
- Genome-wide genotyping data renew knowledge on genetic diversity of a worldwide alfalfa collection and give insights on genetic control of phenology traits.Frontiers in plant science · 2023Article
- Genome-Wide Analysis and Characterization of Eggplant F-Box Gene Superfamily: Gene Evolution and Expression Analysis under Stress.International journal of molecular sciences · 2022Article
- Genome-Wide Identification and Expression Patterns of the F-box Family in Poplar under Salt Stress.International journal of molecular sciences · 2022Article
- De novo transcriptome assembly and analysis of gene expression in different tissues of moth bean (Vigna aconitifolia) (Jacq.) Marechal.BMC plant biology · 2022Article
- Genome-wide identification and expression analysis of the3 Biotech · 2022Article
- Soybean F-Box-Like Protein GmFBL144 Interacts With Small Heat Shock Protein and Negatively Regulates Plant Drought Stress Tolerance.Frontiers in plant science · 2022Article
- Genome-wide characterization, evolution, structure, and expression analysis of the F-box genes in Caenorhabditis.BMC genomics · 2021Article
- Genome-wide identification of F-box proteins in Macrophomina phaseolina and comparison with other fungus.Journal, genetic engineering & biotechnology · 2021Article
Corrections and comments
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe F-box genes constitute one of the largest gene families in plants involved in degradation of cellular proteins. F-box proteins can recognize a wide array of substrates and regulate many important biological processes such as embryogenesis, floral development, plant growth and development, biotic and abiotic stress, hormonal responses and senescence, among others. However, little is known about the F-box genes in the important legume crop, chickpea. The available draft genome sequence of chickpea allowed us to conduct a genome-wide survey of the F-box gene family in chickpea.
resultsA total of 285 F-box genes were identified in chickpea which were classified based on their C-terminal domain structures into 10 subfamilies. Thirteen putative novel motifs were also identified in F-box proteins with no known functional domain at their C-termini. The F-box genes were physically mapped on the 8 chickpea chromosomes and duplication events were investigated which revealed that the F-box gene family expanded largely due to tandem duplications. Phylogenetic analysis classified the chickpea F-box genes into 9 clusters. Also, maximum syntenic relationship was observed with soybean followed by Medicago truncatula, Lotus japonicus and Arabidopsis. Digital expression analysis of F-box genes in various chickpea tissues as well as under abiotic stress conditions utilizing the available chickpea transcriptome data revealed differential expression patterns with several F-box genes specifically expressing in each tissue, few of which were validated by using quantitative real-time PCR.
conclusionsThe genome-wide analysis of chickpea F-box genes provides new opportunities for characterization of candidate F-box genes and elucidation of their function in growth, development and stress responses for utilization in chickpea improvement.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.