Evidence map›Paper›PMID 25758251›Full record

ArticleProteomics2015

Antiviral antibody profiling by high-density protein arrays.

Xiaofang Bian, Peter Wiktor, Peter Kahn, Al Brunner, Amritpal Khela, Kailash Karthikeyan, Kristi Barker, Xiaobo Yu, Mitch Magee, Clive H Wasserfall and 4 more

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proteomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 30 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Comparative Microbiomics Analysis of Antimicrobial Antibody Response between Patients with Lung Cancer and Control Subjects with Benign Pulmonary Nodules.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2023
    Article
  6. Review
  7. Article
  8. Multi-platform Approach for Microbial Biomarker Identification UsingFrontiers in cellular and infection microbiology · 2019
    Article
  9. Proteomics Tracing the Footsteps of Infectious Disease.Molecular & cellular proteomics : MCP · 2017
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Xiaofang BianVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Peter WiktorCenter for Bioelectronics and Biosensors, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Peter KahnEngineering Arts LLC, Tempe, AZ, USA.
Al BrunnerEngineering Arts LLC, Tempe, AZ, USA.
Amritpal KhelaVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Kailash KarthikeyanVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Kristi BarkerVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Xiaobo YuVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Mitch MageeVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Clive H WasserfallDepartment of Pathology, Immunology and Laboratory Medicine, College of Medicine, University of Florida, Gainesville, FL, USA.
David GibsonNorthern Ireland Centre for Stratified Medicine, University of Ulster, Londonderry, UK.
Madeleine E RooneyArthritis Research Group, Centre for Infection and Immunity, Queen's University Belfast, Belfast, UK.
Ji QiuVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Joshua LaBaerVirginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, AZ, USA.
Arizona State University · USEngineering Arts (United States) · USQueen's University Belfast · GBUniversity of Florida · USUniversity of Ulster · GB

Funding

Piezoelectric Pipetting for High Density Nucleic Acid Programmable Protein ArraysR42GM106704 · NIGMS · ENGINEERING ARTS, LLC · PI WIKTOR, PETER J. · 2012 to 2014
$1.8M
NIGMS NIH HHS R42 GM106704NIGMS NIH HHS R42GM106704
6 · The paper itself

Abstract

Viral infections elicit antiviral antibodies and have been associated with various chronic diseases. Detection of these antibodies can facilitate diagnosis, treatment of infection, and understanding of the mechanisms of virus-associated diseases. In this work, we assayed antiviral antibodies using a novel high-density nucleic acid programmable protein array (HD-NAPPA) platform. Individual viral proteins were expressed in situ directly from plasmids encoding proteins in an array of microscopic reaction chambers. Quality of protein display and serum response was assured by comparing intra- and inter-array correlation within or between printing batches with average correlation coefficients of 0.91 and 0.96, respectively. HD-NAPPA showed higher signal-to-background ratio compared with standard NAPPA on planar glass slides and ELISA. Antibody responses to 761 antigens from 25 different viruses were profiled among patients with juvenile idiopathic arthritis and type 1 diabetes. Common and unique antibody reactivity patterns were detected between patients and healthy controls. We believe HD-viral-NAPPA will enable the study of host-pathogen interactions at unprecedented dimensions and elucidate the role of pathogen infections in disease development.

Indexed as

Antibodies, ViralArthritis, JuvenileAutoantibodiesBiomarkersCase-Control StudiesChild, PreschoolDiabetes Mellitus, Type 1Enzyme-Linked Immunosorbent AssayFemaleHost-Pathogen InteractionsHumansImmunoprecipitationMaleNucleic AcidsProtein Array AnalysisProteomicsAntibodies, ViralAutoantibodiesBiomarkersNucleic AcidsViral ProteinsAntiviral antibodiesHD-NAPPAJuvenile idiopathic arthritisProtein arraysType 1 diabetes

Identifiers

PMID25758251
PMCPMC4545592
OpenAlexW2105857986

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.