Evidence map›Paper›PMID 25756647›Full record

ArticlePLoS neglected tropical diseases2015

Association of symptoms and severity of rift valley fever with genetic polymorphisms in human innate immune pathways.

Amy G Hise, Zachary Traylor, Noémi B Hall, Laura J Sutherland, Saidi Dahir, Megan E Ermler, Samuel Muiruri, Eric M Muchiri, James W Kazura, A Desirée LaBeaud and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 2 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 2 syntheses or guidelines pooled it, 38 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  7. Review
  8. Laboratory Animal Models for Rift Valley Fever Virus Disease.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
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  19. Review
  20. Rift Valley fever: biology and epidemiology.The Journal of general virology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Amy G HiseCenter for Global Health and Diseases, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America; Department of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America; Research Service, Louis Stokes Cleveland Department of Veterans Affairs Medical Center, Cleveland, Ohio, United States of America.
Zachary TraylorCenter for Global Health and Diseases, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Noémi B HallDivision of Vector-Borne and Neglected Tropical Diseases, Ministry of Public Health and Sanitation, Nairobi, Kenya.
Laura J SutherlandCenter for Global Health and Diseases, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Saidi DahirDivision of Vector-Borne and Neglected Tropical Diseases, Ministry of Public Health and Sanitation, Nairobi, Kenya.
Megan E ErmlerCenter for Global Health and Diseases, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America; Department of Pathology, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Samuel MuiruriDivision of Vector-Borne and Neglected Tropical Diseases, Ministry of Public Health and Sanitation, Nairobi, Kenya.
Eric M MuchiriDivision of Vector-Borne and Neglected Tropical Diseases, Ministry of Public Health and Sanitation, Nairobi, Kenya.
James W KazuraCenter for Global Health and Diseases, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
A Desirée LaBeaudDivision of Pediatric Infectious Diseases, UCSF Benioff Children's Hospital Oakland, Children's Hospital Oakland Research Institute, Oakland, California, United States of America; Department of Pediatrics, Stanford University, Department of Pediatrics, Stanford, California, United States of America.
Charles H KingCenter for Global Health and Diseases, Case Western Reserve University School of Medicine, Cleveland, Ohio, United States of America.
Catherine M SteinDepartment of Epidemiology and Biostatistics, Case Western Reserve University, Cleveland, Ohio, United States of America.
Ministry of Health · KECase Western Reserve University · USCenter for Global Health · USStanford University · USUniversity School · US

Funding

Virology and Smallpox VaccinationsU54AI057160 · NIAID · WASHINGTON UNIVERSITY · PI RAY, RANJIT · 2003 to 2013
$80.9M
Immunology Training Program-PredoctoralT32AI089474 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI COBB, BRIAN A · 2010 to 2025
$3.4M
Innate Immune Sensing of Rift Valley Fever VirusR21AI079617 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI HISE, AMY G · 2009 to 2010
$463k
NIAID NIH HHS R21 AI079617NIAID NIH HHS R21AI079617NIAID NIH HHS T32 AI089474NIAID NIH HHS T32AI089474NIAID NIH HHS U54 AI057160NIAID NIH HHS U54AI057160
6 · The paper itself

Abstract

backgroundMultiple recent outbreaks of Rift Valley Fever (RVF) in Africa, Madagascar, and the Arabian Peninsula have resulted in significant morbidity, mortality, and financial loss due to related livestock epizootics. Presentation of human RVF varies from mild febrile illness to meningoencephalitis, hemorrhagic diathesis, and/or ophthalmitis with residual retinal scarring, but the determinants for severe disease are not understood. The aim of the present study was to identify human genes associated with RVF clinical disease in a high-risk population in Northeastern Province, Kenya. METHODOLOGY/PRINCIPAL

findingsWe conducted a cross-sectional survey among residents (N = 1,080; 1-85 yrs) in 6 villages in the Sangailu Division of Ijara District. Participants completed questionnaires on past symptoms and exposures, physical exam, vision testing, and blood collection. Single nucleotide polymorphism (SNP) genotyping was performed on a subset of individuals who reported past clinical symptoms consistent with RVF and unrelated subjects. Four symptom clusters were defined: meningoencephalitis, hemorrhagic fever, eye disease, and RVF-not otherwise specified. SNPs in 46 viral sensing and response genes were investigated. Association was analyzed between SNP genotype, serology and RVF symptom clusters. The meningoencephalitis symptom phenotype cluster among seropositive patients was associated with polymorphisms in DDX58/RIG-I and TLR8. Having three or more RVF-related symptoms was significantly associated with polymorphisms in TICAM1/TRIF, MAVS, IFNAR1 and DDX58/RIG-I. SNPs significantly associated with eye disease included three different polymorphisms TLR8 and hemorrhagic fever symptoms associated with TLR3, TLR7, TLR8 and MyD88. CONCLUSIONS/SIGNIFICANCE: Of the 46 SNPs tested, TLR3, TLR7, TLR8, MyD88, TRIF, MAVS, and RIG-I were repeatedly associated with severe symptomatology, suggesting that these genes may have a robust association with RVFV-associated clinical outcomes. Studies of these and related genetic polymorphisms are warranted to advance understanding of RVF pathogenesis.

Indexed as

Immunity, InnatePolymorphism, Single NucleotideAdaptor Proteins, Vesicular TransportAdolescentAdultAgedAged, 80 and overAnimalsChildChild, PreschoolCross-Sectional StudiesFemaleGenotypeHaplotypesHumansInfantAdaptor Proteins, Vesicular TransportTICAM1 protein, humanTLR3 protein, humanToll-Like Receptor 3

Identifiers

PMID25756647
PMCPMC4355584
OpenAlexW1968215930

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.