Evidence map›Paper›PMID 25755419›Full record

ArticleJournal of clinical and experimental hepatology2012

The Distribution of Genotype and Allelic Frequency of IL28B Gene Polymorphism in Andhra Pradesh, India.

Siddapuram Sivaprasad, Padaki Nagaraja Rao, Rajesh Gupta, Kaitha Ashwini, Duvvuru Nageshwar Reddy

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical and experimental hepatology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Virusdisease · 2019
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  5. Hepatobiliary quiz 11 (2014).Journal of clinical and experimental hepatology · 2014
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Siddapuram SivaprasadDepartment of Medical Genetics, Institute of Basic Sciences and Translational Research, Hyderabad, India.
Padaki Nagaraja RaoAsian Institute of Gastroenterology, Hyderabad, India.
Rajesh GuptaAsian Institute of Gastroenterology, Hyderabad, India.
Kaitha AshwiniDepartment of Medical Genetics, Institute of Basic Sciences and Translational Research, Hyderabad, India.
Duvvuru Nageshwar ReddyAsian Institute of Gastroenterology, Hyderabad, India.
Asian Institute of Gastroenterology · INInstitute of Genetics and Hospital for Genetic Diseases · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe single nucleotide polymorphism (SNP) of IL28B gene on chromosome 19, encoding for the interferon (IFN)-λ-3 is strongly associated with treatment response to pegylated-IFN and ribavirin in patients infected with different genotypes of hepatitis C virus (HCV). Difference between ethnicity and treatment response rates suggesting a key role of host genetics. The IL28B polymorphism (rs12979860C/T) shows a marked differential distribution between racial groups.

aimThe present study is aimed to evaluate genotype and allelic frequency of IL28B gene polymorphism (rs12979860C/T) in Andhra Pradesh, India.

methodsA total of 220 healthy controls were recruited for the study. The genotyping of SNP rs12979860C/T on IL28B gene was performed by polymerase chain reaction-direct sequencing method.

resultThe frequency of CC genotype was found to be significantly (59.09%) higher compared to CT (34.09%) and TT (6.81%) genotypes, respectively. The frequency of major allele C is 0.762 whereas minor allele T is 0.238.

conclusionThe higher distribution of genotype 'CC' of SNP, rs12979860C/T of IL28B gene in study subjects is suggestive of better response of HCV patients to standard anti-HCV therapy.

Indexed as

CHC, chronic hepatitis C virusGenotypeGWAS, genome-wide association studiesHCC, hepatocellular carcinomaHCV, hepatitis C virushepatitis C virusIL28B geneIL, interleukinPEG-IFN-α, pegylated-interferon-αRBC, red blood cellsRBV, ribavirinsingle nucleotide polymorphismSNP, single nucleotide polymorphismSVR, sustained virological responseWBC, white blood cells

Identifiers

PMID25755419
PMCPMC3940249
OpenAlexW2095072383

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.