Evidence map›Paper›PMID 25755403›Full record

ArticleJournal of clinical and experimental hepatology2012

Human Interferon Regulatory Factor 2 Gene Expression is Induced in Chronic Hepatitis C Virus Infection-A Possible Mode of Viral Persistence.

Rathindra M Mukherjee, Budhapriyavilas Bansode, Puja Gangwal, Aparna Jakkampudi, Panyala B Reddy, Padaki N Rao, Rajesh Gupta, D Nageshwar Reddy

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical and experimental hepatology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Rathindra M MukherjeeAsian Health Care Foundation, Somajiguda - 500082, Hyderabad, AP, India.
Budhapriyavilas BansodeAsian Health Care Foundation, Somajiguda - 500082, Hyderabad, AP, India.
Puja GangwalAsian Health Care Foundation, Somajiguda - 500082, Hyderabad, AP, India.
Aparna JakkampudiAsian Health Care Foundation, Somajiguda - 500082, Hyderabad, AP, India.
Panyala B ReddyAsian Health Care Foundation, Somajiguda - 500082, Hyderabad, AP, India.
Padaki N RaoAsian Institute of Gastroenterology, Somajiguda - 500082, Hyderabad, AP, India.
Rajesh GuptaAsian Institute of Gastroenterology, Somajiguda - 500082, Hyderabad, AP, India.
D Nageshwar ReddyAsian Institute of Gastroenterology, Somajiguda - 500082, Hyderabad, AP, India.
Asian Institute of Gastroenterology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe interferon regulatory factors (IRFs) are a family of transcription factors known to be involved in the modulation of cellular responses to interferons (IFNs) and viral infection. While IRF-1 acts as a positive regulator, IRF-2 is known to repress IFN-mediated gene expression. The increase in the IRF-1/IRF-2 ratio is considered as an important event in the transcriptional activation of IFN-α gene toward development of the cellular antiviral response.

objectiveThis study was performed to assess the expression of IRF mRNAs along with the expression level of IFN-α, its receptor (IFNAR-1), and the signal transduction factor (STAT-1) in treatment naive hepatitis C virus (HCV)-infected subjects. MATERIALS: Thirty-five chronically infected (CHC) patients and 39 voluntary blood donors as controls were included in the study. Quantification of HCV-RNA (ribonucleic acid) and genotyping were done by real-time polymerase chain reaction (PCR) and hybridization assays, respectively, using patient's serum/plasma. In both controls and patients, the serum level of IFN-α and IFN-α was measured by flow cytometry. Target gene expressions were studied by retro-transcription of respective mRNAs extracted from peripheral blood mononuclear cells (PBMCs) followed by PCR amplification and densitometry. Minus-strand HCV-RNA as a marker of viral replication in PBMCs was detected by an inhouse PCR assay.

resultsBoth IRF-1 and IRF-2 genes were significantly enhanced in CHC than in control subjects (P < 0.001). A significant positive correlation (r (2) = 0.386, P <0.01) was obtained between higher IRF-2 gene expression and increasing level of HCV-RNA. Chronically infected subjects (13%) harboring replicating HCV in PBMCs showed no significant differences in gene expressions than the subjects without HCV in PBMCs.

conclusionOur findings indicate that HCV modulates host immunity by inducing IRF-2 gene to counteract IRF-1-mediated IFN-α gene expression. Since the IRF-2 gene is known to encode oncogenic protein, the role of IRF-2 in CHC patients developing hepatocellular carcinoma warrants further studies.

Indexed as

CHC, chronic hepatitis CCLD, chronic liver diseaseGene expressionHBsAg, hepatitis B virus surface antigenHBV, hepatitis B virusHCC, hepatocellular carcinomaHCV, hepatitis C virushepatitis C virusIFN, interferoninterferon-alfainterferon regulatory factor 2IRES, internal ribosomal entry siteIRF, interferon regulatory factorsPBMC, peripheral blood mononuclear cellsPCR, polymerase chain reactionperipheral blood mononuclear cellsSVR, sustained virological responseVCAM, vascular cell adhesion molecule

Identifiers

PMID25755403
PMCPMC3940332
OpenAlexW2010144425

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.