Evidence map›Paper›PMID 25755088›Full record

ArticleMicrobiologyOpen2015

NlpI-mediated modulation of outer membrane vesicle production through peptidoglycan dynamics in Escherichia coli.

Carmen Schwechheimer, Daniel L Rodriguez, Meta J Kuehn

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Frontiers in bacterial outer membrane vesicles: From basic characteristics to cancer therapy.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2026
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Review
  12. Review
  13. Article
  14. Characterization ofIranian journal of microbiology · 2025
    Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Multimodal inhibitory effect of matcha onMicrobiology spectrum · 2024
    Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Carmen SchwechheimerDepartment of Biochemistry, Duke University Medical Center, Durham, North Carolina, 27710.
Daniel L RodriguezDepartment of Biochemistry, Duke University Medical Center, Durham, North Carolina, 27710.
Meta J KuehnDepartment of Biochemistry, Duke University Medical Center, Durham, North Carolina, 27710.

Funding

Triggers and Consequences of Bacterial Envelope StressR01GM099471 · NIGMS · DUKE UNIVERSITY · PI KUEHN, META J · 2012 to 2015
$1.1M
NIGMS NIH HHS 5R01GM099471NIGMS NIH HHS R01 GM099471
6 · The paper itself

Abstract

Outer membrane vesicles (OMVs) are ubiquitously secreted from the outer membrane (OM) of Gram-negative bacteria. These heterogeneous structures are composed of OM filled with periplasmic content from the site of budding. By analyzing mutants that have vesicle production phenotypes, we can gain insight into the mechanism of OMV budding in wild-type cells, which has thus far remained elusive. In this study, we present data demonstrating that the hypervesiculation phenotype of the nlpI deletion mutant of Escherichia coli correlates with changes in peptidoglycan (PG) dynamics. Our data indicate that in stationary phase cultures the nlpI mutant exhibits increased PG synthesis that is dependent on spr, consistent with a model in which NlpI controls the activity of the PG endopeptidase Spr. In log phase, the nlpI mutation was suppressed by a dacB mutation, suggesting that NlpI regulates penicillin-binding protein 4 (PBP4) during exponential growth. The data support a model in which NlpI negatively regulates PBP4 activity during log phase, and Spr activity during stationary phase, and that in the absence of NlpI, the cell survives by increasing PG synthesis. Further, the nlpI mutant exhibited a significant decrease in covalent outer membrane (OM-PG) envelope stabilizing cross-links, consistent with its high level of OMV production. Based on these results, we propose that one mechanism wild-type Gram-negative bacteria can use to modulate vesiculation is by altering PG-OM cross-linking via localized modulation of PG degradation and synthesis.

Indexed as

Cell WallCysteine EndopeptidasesEscherichia coliEscherichia coli ProteinsGene DeletionGene Expression Regulation, BacterialLipoproteinsMutationPeptidoglycanPhenotypeSignal TransductionCysteine EndopeptidasesEscherichia coli ProteinsLipoproteinsmepS protein, E coliNlpI protein, E coliPeptidoglycanEndopeptidaseGram-negative bacteriaLppmureinPBP4secretionSpr

Identifiers

PMID25755088
PMCPMC4475382

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.