ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015
High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 1 of them a synthesis that pooled it.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
31 citing papers in PubMed, 1 synthesis or guideline pooled it, 73 citations in OpenAlex.
- Meta-analysis of seed weight QTLome using a consensus and highly dense genetic map in Brassica napus L.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Pooled it
- GhUGT84A1 underlying a novel locus qOC-A03-1 regulates cottonseed oil content revealed by integrated deep resequencing and QTL mapping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- GBS-based identification ofFrontiers in plant science · 2026Article
- Resequencing and phenotyping of the first highly inbred eggplant multiparent population revealHorticulture research · 2025Article
- Benchmarking of low coverage sequencing workflows for precision genotyping in eggplant.BMC plant biology · 2025Article
- haploMAGIC: accurate phasing and detection of recombination in multiparental populations despite genotyping errors.G3 (Bethesda, Md.) · 2024Article
- Skim resequencing finely maps the downy mildew resistance lociHorticulture research · 2023Article
- Mapping and selection of downy mildew resistance in spinach cv. whale by low coverage whole genome sequencing.Frontiers in plant science · 2022Article
- Article
- Skim sequencing: an advanced NGS technology for crop improvement.Journal of genetics · 2021Review
- Skim-Sequencing Based Genotyping Reveals Genetic Divergence of the Wild and Domesticated Population of Black Tiger Shrimp (Biology · 2020Article
- Enhancing Genetic Gain through Genomic Selection: From Livestock to Plants.Plant communications · 2020Review
- Genotyping-by-sequencing based QTL mapping for rice grain yield under reproductive stage drought stress tolerance.Scientific reports · 2019Article
- Identification of Markers Associated with Yield Traits and Morphological Features in Maize (Plants (Basel, Switzerland) · 2019Article
- A reference genome for pea provides insight into legume genome evolution.Nature genetics · 2019Article
- Generating High Density, Low Cost Genotype Data in Soybean [G3 (Bethesda, Md.) · 2019Article
- Broadening the bread wheat D genome.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Review
- Accelerating crop genetic gains with genomic selection.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019Review
- Evaluation and Recommendations for Routine Genotyping Using Skim Whole Genome Re-sequencing in Canola.Frontiers in plant science · 2018Article
- Genetic and Molecular Regulation of Seed Storage Proteins (SSPs) to Improve Protein Nutritional Value of Oilseed Rape (Frontiers in plant science · 2018Article
Corrections and comments
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Authors and funding
13 authors at 6 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageWe characterise the distribution of crossover and non-crossover recombination in Brassica napus and Cicer arietinum using a low-coverage genotyping by sequencing pipeline SkimGBS. The growth of next-generation DNA sequencing technologies has led to a rapid increase in sequence-based genotyping for applications including diversity assessment, genome structure validation and gene-trait association. We have established a skim-based genotyping by sequencing method for crop plants and applied this approach to genotype-segregating populations of Brassica napus and Cicer arietinum. Comparison of progeny genotypes with those of the parental individuals allowed the identification of crossover and non-crossover (gene conversion) events. Our results identify the positions of recombination events with high resolution, permitting the mapping and frequency assessment of recombination in segregating populations.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.