Evidence map›Paper›PMID 25754412›Full record

ArticleMagnetic resonance in medicine2016

Disambiguating the optic nerve from the surrounding cerebrospinal fluid: Application to MS-related atrophy.

Robert L Harrigan, Andrew J Plassard, Frederick W Bryan, Gabriela Caires, Louise A Mawn, Lindsey M Dethrage, Siddharama Pawate, Robert L Galloway, Seth A Smith, Bennett A Landman

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Improved Automatic Optic Nerve Radius Estimation from High Resolution MRI.Proceedings of SPIE--the International Society for Optical Engineering · 2017
    Article
  7. Short Term Reproducibility of a High Contrast 3-D Isotropic Optic Nerve Imaging Sequence in Healthy Controls.Proceedings of SPIE--the International Society for Optical Engineering · 2016
    Article
  8. Article
  9. Quantitative characterization of optic nerve atrophy in patients with multiple sclerosis.Multiple sclerosis journal - experimental, translational and clinical
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Robert L HarriganDepartment of Electrical Engineering, Vanderbilt University, Nashville, Tennessee, USA.
Andrew J PlassardDepartment of Computer Science, Vanderbilt University, Nashville, Tennessee, USA.
Frederick W BryanDepartment of Electrical Engineering, Vanderbilt University, Nashville, Tennessee, USA.
Gabriela CairesBiomedical Engineering, Federal University of Rio Grande do Norte, Natal, RN, Brazil.
Louise A MawnVanderbilt Eye Institute, Vanderbilt University, Nashville, Tennessee, USA.
Lindsey M DethrageInstitute of Imaging Science, Vanderbilt University, Nashville, Tennessee, USA.
Siddharama PawateDepartment of Neurology, Vanderbilt University, Nashville, Tennessee, USA.
Robert L GallowayDepartment of Biomedical Engineering, Vanderbilt University, Nashville, Tennessee, USA.
Seth A SmithInstitute of Imaging Science, Vanderbilt University, Nashville, Tennessee, USA.
Bennett A LandmanDepartment of Electrical Engineering, Vanderbilt University, Nashville, Tennessee, USA.

Funding

VANDERBILT UNIVERSITY CTSA FOR PEDIATRIC RESEARCHUL1RR024975 · NCRR · VANDERBILT UNIVERSITY · PI BERNARD, GORDON RAPHAEL · 2007 to 2011
$45.7M
The Vanderbilt Institute for Clinical and Translational Research (VICTR)UL1TR000445 · NCATS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BERNARD, GORDON RAPHAEL · 2012 to 2016
$41.4M
Training in Vision ResearchT32EY007135 · NEI · VANDERBILT UNIVERSITY · PI GEOFFREY F WOODMAN · 1994 to 2026
$5.8M
Microstructural Characterization of the Optic Nerve in Optic NeuritisR01EY023240 · NEI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SMITH, SETH A · 2014 to 2017
$1.0M
Institutional Predoctoral Training Program in Biomedical Imaging ScienceT32EB014841 · NIBIB · VANDERBILT UNIVERSITY · PI GORE, JOHN C · 2013 to 2017
$771k
Quantitative Image Analysis Techniques for Optic Nerve DiseaseR21EY024036 · NEI · VANDERBILT UNIVERSITY · PI LANDMAN, BENNETT A. · 2014 to 2015
$410k
NCATS NIH HHS 2 UL1 TR000445-06NCATS NIH HHS UL1 TR000445NCRR NIH HHS UL1 RR024975NCRR NIH HHS UL1 RR024975-01NEI NIH HHS 5T32EY007135NEI NIH HHS R01 EY023240NEI NIH HHS R01EY023240NEI NIH HHS R21 EY024036NEI NIH HHS R21EY024036NEI NIH HHS T32 EY007135NIBIB NIH HHS 1T32EB014841NIBIB NIH HHS K01EB009210NIBIB NIH HHS T32 EB014841
6 · The paper itself

Abstract

purposeOur goal is to develop an accurate, automated tool to characterize the optic nerve (ON) and cerebrospinal fluid (CSF) to better understand ON changes in disease.

methodsMulti-atlas segmentation is used to localize the ON and sheath on T2-weighted MRI (0.6 mm(3) resolution). A sum of Gaussian distributions is fit to coronal slice-wise intensities to extract six descriptive parameters, and a regression forest is used to map the model space to radii. The model is validated for consistency using tenfold cross-validation and for accuracy using a high resolution (0.4 mm(2) reconstructed to 0.15 mm(2)) in vivo sequence. We evaluated this model on 6 controls and 6 patients with multiple sclerosis (MS) and a history of optic neuritis.

resultsIn simulation, the model was found to have an explanatory R-squared for both ON and sheath radii greater than 0.95. The accuracy of the method was within the measurement error on the highest possible in vivo resolution. Comparing healthy controls and patients with MS, significant structural differences were found near the ON head and the chiasm, and structural trends agreed with the literature.

conclusionThis is a first demonstration that the ON can be exclusively, quantitatively measured and separated from the surrounding CSF using MRI.

Indexed as

AdultAlgorithmsCerebrospinal FluidComputer SimulationFemaleHumansImage EnhancementImage Interpretation, Computer-AssistedMagnetic Resonance ImagingMaleModels, StatisticalMultiple SclerosisOptic AtrophyOptic NervePattern Recognition, AutomatedReproducibility of Resultsmagnetic resonance imagingmulti-atlasnonconvex optimizationoptic nervesegmentation

Identifiers

PMID25754412
PMCPMC4561596

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.