Evidence map›Paper›PMID 25754198›Full record

ArticleInfection and immunity2015

High-throughput, signature-tagged mutagenic approach to identify novel virulence factors of Yersinia pestis CO92 in a mouse model of infection.

Duraisamy Ponnusamy, Eric C Fitts, Jian Sha, Tatiana E Erova, Elena V Kozlova, Michelle L Kirtley, Bethany L Tiner, Jourdan A Andersson, Ashok K Chopra

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
  2. Stone AgeProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Plague vaccines: new developments in an ongoing search.Applied microbiology and biotechnology · 2021
    Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Type VI Secretion Systems Present New Insights on PathogenicFrontiers in cellular and infection microbiology · 2018
    Review
  9. Review
  10. Identification of New Virulence Factors and Vaccine Candidates forFrontiers in cellular and infection microbiology · 2017
    Article
  11. Plague Vaccines: Status and Future.Advances in experimental medicine and biology · 2016
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Duraisamy PonnusamyDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA.
Eric C FittsDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA.
Jian ShaDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA Institute for Human Infections and Immunity, UTMB, Galveston, Texas, USA jisha@utmb.edu achopra@utmb.edu.
Tatiana E ErovaDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA.
Elena V KozlovaDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA.
Michelle L KirtleyDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA.
Bethany L TinerDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA.
Jourdan A AnderssonDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA.
Ashok K ChopraDepartment of Microbiology and Immunology, UTMB, Galveston, Texas, USA Institute for Human Infections and Immunity, UTMB, Galveston, Texas, USA Sealy Center for Vaccine Development, UTMB, Galveston, Texas, USA Center for Biodefense and Emerging Infectious Diseases, UTMB, Galveston, Texas, USA jisha@utmb.edu achopra@utmb.edu.
Galveston College · USThe University of Texas Medical Branch at Galveston · US

Funding

Health, Safety and Training ServicesUC7AI070083 · NIAID · UNIVERSITY OF TEXAS MED BR GALVESTON · PI LEMON, STANLEY M. · 2006 to 2010
$49.5M
Identification of New Antigens for a Plague VaccineR01AI064389 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI CHOPRA, ASHOK K · 2005 to 2015
$3.8M
Biodefense Training ProgramT32AI060549 · NIAID · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI ASHOK K CHOPRA, Janice J Endsley · 2004 to 2026
$3.0M
NIAID NIH HHS AI060549NIAID NIH HHS AI064389NIAID NIH HHS AI070083NIAID NIH HHS R01 AI064389NIAID NIH HHS T32 AI060549NIAID NIH HHS UC7 AI070083
6 · The paper itself

Abstract

The identification of new virulence factors in Yersinia pestis and understanding their molecular mechanisms during an infection process are necessary in designing a better vaccine or to formulate an appropriate therapeutic intervention. By using a high-throughput, signature-tagged mutagenic approach, we created 5,088 mutants of Y. pestis strain CO92 and screened them in a mouse model of pneumonic plague at a dose equivalent to 5 50% lethal doses (LD50) of wild-type (WT) CO92. From this screen, we obtained 118 clones showing impairment in disseminating to the spleen, based on hybridization of input versus output DNA from mutant pools with 53 unique signature tags. In the subsequent screen, 20/118 mutants exhibited attenuation at 8 LD50 when tested in a mouse model of bubonic plague, with infection by 10/20 of the aforementioned mutants resulting in 40% or higher survival rates at an infectious dose of 40 LD50. Upon sequencing, six of the attenuated mutants were found to carry interruptions in genes encoding hypothetical proteins or proteins with putative functions. Mutants with in-frame deletion mutations of two of the genes identified from the screen, namely, rbsA, which codes for a putative sugar transport system ATP-binding protein, and vasK, a component of the type VI secretion system, were also found to exhibit some attenuation at 11 or 12 LD50 in a mouse model of pneumonic plague. Likewise, among the remaining 18 signature-tagged mutants, 9 were also attenuated (40 to 100%) at 12 LD50 in a pneumonic plague mouse model. Previously, we found that deleting genes encoding Braun lipoprotein (Lpp) and acyltransferase (MsbB), the latter of which modifies lipopolysaccharide function, reduced the virulence of Y. pestis CO92 in mouse models of bubonic and pneumonic plague. Deletion of rbsA and vasK genes from either the Δlpp single or the Δlpp ΔmsbB double mutant augmented the attenuation to provide 90 to 100% survivability to mice in a pneumonic plague model at 20 to 50 LD50. The mice infected with the Δlpp ΔmsbB ΔrbsA triple mutant at 50 LD50 were 90% protected upon subsequent challenge with 12 LD50 of WT CO92, suggesting that this mutant or others carrying combinational deletions of genes identified through our screen could potentially be further tested and developed into a live attenuated plague vaccine(s).

Indexed as

MutagenesisAnimalsDisease Models, AnimalFemaleGenetic TestingMicePlagueSurvival AnalysisVirulenceVirulence FactorsYersinia pestisVirulence Factors

Identifiers

PMID25754198
PMCPMC4399035
OpenAlexW2153900350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.