Evidence map›Paper›PMID 25754085›Full record

ArticleMolecular psychiatry2016

Neural transcriptome of constitutional Pten dysfunction in mice and its relevance to human idiopathic autism spectrum disorder.

A K Tilot, G Bebek, F Niazi, J B Altemus, T Romigh, T W Frazier, C Eng

Open access · bronzeAbstract read
In one paragraph

Article in Molecular psychiatry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 66 citations in OpenAlex.

  1. Pooled it
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  12. A randomized double-blind controlled trial of everolimus in individuals withContemporary clinical trials communications · 2021
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  19. PTEN in Hereditary and Sporadic Cancer.Cold Spring Harbor perspectives in medicine · 2020
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

A K TilotGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.
G BebekGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.
F NiaziGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.
J B AltemusGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.
T RomighGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.
T W FrazierGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.
C EngGenomic Medicine Institute, Cleveland Clinic, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-3693-5145
Cleveland Clinic · US

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR024989 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI DAVIS, PAMELA B · 2007 to 2011
$53.7M
Clinical and Translational Science Collaborative of ClevelandKL2TR000440 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$11.1M
Case Western Reserve University/Cleveland Clinic CTSA (KL2)KL2RR024990 · NCRR · CASE WESTERN RESERVE UNIVERSITY · PI DAVIS, PAMELA B · 2007 to 2011
$9.5M
PTEN Nuclear-Cytoplasmic Localization in Breast CancerR01CA118980 · NCI · CLEVELAND CLINIC LERNER COM-CWRU · PI ENG, CHARIS · 2007 to 2011
$1.8M
NCATS NIH HHS KL2 TR000440NCI NIH HHS R01 CA118980NCI NIH HHS R01CA118989NCRR NIH HHS KL2 RR024990NCRR NIH HHS UL1 RR024989
6 · The paper itself

Abstract

Autism spectrum disorder (ASD) is a neurodevelopmental condition with a clear, but heterogeneous, genetic component. Germline mutations in the tumor suppressor Pten are a well-established risk factor for ASD with macrocephaly, and conditional Pten mouse models have impaired social behavior and brain development. Some mutations observed in patients disrupt the normally balanced nuclear-cytoplasmic localization of the Pten protein, and we developed the Pten(m3m4) model to study the effects of a cytoplasm-predominant Pten. In this model, germline mislocalization of Pten causes inappropriate social behavior with intact learning and memory, a profile reminiscent of high-functioning ASD. These animals also exhibit histological evidence of neuroinflammation and expansion of glial populations by 6 weeks of age. We hypothesized that the neural transcriptome of this model would be altered in a manner that could inform human idiopathic ASD, a constitutional condition. Using total RNA sequencing, we found progressive disruption of neural gene expression in Pten(m3m4) mice from 2-6 weeks of age, involving both immune and synaptic pathways. These alterations include downregulation of many highly coexpressed human ASD-susceptibility genes. Comparison with a human cortical development coexpression network revealed that genes disrupted in Pten(m3m4) mice were enriched in the same areas as those of human ASD. Although Pten-related ASD is relatively uncommon, our observations suggest that the Pten(m3m4) model recapitulates multiple molecular features of human ASD, and that Pten operates far upstream of common pathways within ASD pathogenesis.

Indexed as

TranscriptomeAnimalsAutism Spectrum DisorderCerebral CortexCohort StudiesDisease Models, AnimalGene ExpressionMaleMice, TransgenicMutationNeuronsPTEN PhosphohydrolaseSequence Analysis, RNAPTEN PhosphohydrolasePten protein, mouse

Identifiers

PMID25754085
PMCPMC4565786
OpenAlexW1985937914

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.