Evidence map›Paper›PMID 25751658›Full record

ArticlePloS one2015

In silico analysis of usher encoding genes in Klebsiella pneumoniae and characterization of their role in adhesion and colonization.

Fida Khater, Damien Balestrino, Nicolas Charbonnel, Jean François Dufayard, Sylvain Brisse, Christiane Forestier

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 51 citations in OpenAlex.

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  8. Deciphering the gastrointestinal carriage ofInfection and immunity · 2024
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  13. Regulation of biofilm formation inFrontiers in microbiology · 2023
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  19. Frontiers in cellular and infection microbiology · 2022
    Review
  20. FromMicroorganisms · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Fida KhaterLMGE-UMR CNRS 6023- Clermont Ferrand, 63000, France.
Damien BalestrinoLMGE-UMR CNRS 6023- Clermont Ferrand, 63000, France.
Nicolas CharbonnelLMGE-UMR CNRS 6023- Clermont Ferrand, 63000, France.
Jean François DufayardCIRAD, UMR 1334 AGAP, Avenue Agropolis, 34398 Montpellier, France.
Sylvain BrisseInstitut Pasteur, Microbial Evolutionary Genomics, 75015 Paris, France; CNRS, UMR 3525, Paris, France.
Christiane ForestierLMGE-UMR CNRS 6023- Clermont Ferrand, 63000, France.
Centre National de la Recherche Scientifique · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chaperone/usher (CU) assembly pathway is used by a wide range of Enterobacteriaceae to assemble adhesive surface structures called pili or fimbriae that play a role in bacteria-host cell interactions. In silico analysis revealed that the genome of Klebsiella pneumoniae LM21 harbors eight chromosomal CU loci belonging to γκп and ϭ clusters. Of these, only two correspond to previously described operons, namely type 1 and type 3-encoding operons. Isogenic usher deletion mutants of K. pneumoniae LM21 were constructed for each locus and their role in adhesion to animal (Intestine 407) and plant (Arabidopsis thaliana) cells, biofilm formation and murine intestinal colonization was investigated. Type 3 pili usher deleted mutant was impaired in all assays, whereas type 1 pili usher deleted mutant only showed attenuation in adhesion to plant cells and in intestinal colonization. The LM21ΔkpjC mutant was impaired in its capacity to adhere to Arabidopsis cells and to colonize the murine intestine, either alone or in co-inoculation experiments. Deletion of LM21kpgC induced a significant decrease in biofilm formation, in adhesion to animal cells and in colonization of the mice intestine. The LM21∆kpaC and LM21∆kpeC mutants were only attenuated in biofilm formation and the adhesion abilities to Arabidopsis cells, respectively. No clear in vitro or in vivo effect was observed for LM21∆kpbC and LM21∆kpdC mutants. The multiplicity of CU loci in K. pneumoniae genome and their specific adhesion pattern probably reflect the ability of the bacteria to adhere to different substrates in its diverse ecological niches.

Indexed as

AnimalsArabidopsisBacterial AdhesionBacterial ProteinsBiofilmsCell LineFemaleGene ExpressionGenes, BacterialGenetic LociHumansKlebsiella InfectionsKlebsiella pneumoniaeMiceMolecular ChaperonesPhylogenyBacterial ProteinsMolecular Chaperones

Identifiers

PMID25751658
PMCPMC4353729
OpenAlexW2087267131

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.