ArticleMeta gene2015
Start codon targeted (SCoT) polymorphism reveals genetic diversity in wild and domesticated populations of ramie (Boehmeria nivea L. Gaudich.), a premium textile fiber producing species.
Article in Meta gene, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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Who cites it
12 citing papers in PubMed.
- Integrating Morpho-Physiological, Biochemical, and Molecular Genotyping for Selection of Drought-Tolerant Pigeon Pea (Plants (Basel, Switzerland) · 2024Article
- Genetic and phytochemical evaluation of M2 generation mutants of fenugreek (Trigonella foenum-graecum L.) induced by gamma rays and Ethyl Methane Sulphonate (EMS).Molecular biology reports · 2024Article
- Exploring the genetic diversity and population structure of aerial yams (Dioscorea bulbifera L.) DArT-seq and agronomic traits.PloS one · 2024Article
- Article
- Genetic diversity among genotypes of3 Biotech · 2022Article
- Molecular diversity analysis in hexaploid wheat (Triticum aestivum L.) and two Aegilops species (Aegilops crassa and Aegilops cylindrica) using CBDP and SCoT markers.Journal, genetic engineering & biotechnology · 2021Article
- Comparative assessment of ISSR, RAPD, and SCoT markers for genetic diversity in Clerodendrum species of North East India.Molecular biology reports · 2020Article
- Selection of Reference Genes for qPCR Analyses of Gene Expression in Ramie Leaves and Roots across Eleven Abiotic/Biotic Treatments.Scientific reports · 2019Article
- Translation initiation codon (ATG) or SCoT markers-based polymorphism study within and across variousJournal of genetics · 2019Article
- Genetic diversity and structure ofHereditas · 2019Article
- Molecular diversity assessment of a world collection of safflower genotypes by SRAP and SCoT molecular markers.Physiology and molecular biology of plants : an international journal of functional plant biology · 2018Article
- Antioxidant System Response and cDNA-SCoT Marker Profiling inInternational journal of genomics · 2017Article
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7 authors.
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Abstract
Twenty-four start codon targeted (SCoT) markers were used to assess genetic diversity and population structure of indigenous, introduced and domesticated ramie (Boehmeria nivea L. Gaudich.). A total of 155 genotypes from five populations were investigated for SCoT polymorphism, which produced 136 amplicons with 87.5% polymorphism. Polymorphism information content and resolving power of the SCoT markers were 0.69 and 3.22, respectively. The Indian ramie populations exhibited high SCoT polymorphism (> 50%), high genetic differentiation (GST = 0.27) and moderate gene flow (Nm = 1.34). Analysis of molecular variance identified significant differences for genetic polymorphism among the populations explaining 13.1% of the total variation. The domesticated population exhibited higher genetic polymorphism and heterozygosity compared to natural populations. Cluster analysis supported population genetic analysis and suggested close association between introduced and domesticated genotypes. The present study shows effectiveness of employing SCoT markers in a cross pollinated heterozygous species like Boehmeria, and would be useful for further studies in population genetics, conservation genetics and cultivar improvement.
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