Evidence map›Paper›PMID 25749476›Full record

ArticleInternational journal of molecular sciences2015

Transcriptome microRNA profiling of bovine mammary glands infected with Staphylococcus aureus.

Rui Li, Cheng-Long Zhang, Xiang-Xiang Liao, Dan Chen, Wen-Qiang Wang, Yi-Hui Zhu, Xiao-Han Geng, De-Jun Ji, Yong-Jiang Mao, Yun-Chen Gong and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
16.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 100 citations in OpenAlex.

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  17. Exosomes in Mastitis-Research Status, Opportunities, and Challenges.Animals : an open access journal from MDPI · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Rui LiCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. lirui871025@126.com.
Cheng-Long ZhangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. yangdazhangcl@163.com.
Xiang-Xiang LiaoCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. kevin89free@163.com.
Dan ChenCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. dan0513_2015@126.com.
Wen-Qiang WangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. 15371254521@163.com.
Yi-Hui ZhuCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. zhuyh2015@163.com.
Xiao-Han GengCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. xhgeng2012@163.com.
De-Jun JiCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. djji@yzu.edu.cn.
Yong-Jiang MaoCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. cattle@yzu.edu.cn.
Yun-Chen GongThe Centre for the Analysis of Genome Evolution and Function (CAGEF), University of Toronto, Toronto, ON M5S 2J7, Canada. yunchen.gong@utoronto.ca.
Zhang-Ping YangCollege of Animal Science and Technology, Yangzhou University, Yangzhou 225009, China. yzp@yzu.edu.cn.
Yangzhou University · CNUniversity of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MicroRNAs are small non-coding RNA molecules that are important regulators of gene expression at the post-transcriptional level. miRNAs impact the processes of cell proliferation, differentiation and apoptosis. Thus, the regulation of miRNA expression profiles associated with mastitis will be conducive for its control. In this study, Staphylococcus aureus (S. aureus) was administered to the mammary gland of Chinese Holstein cows to construct a bacteria-type mastitis model. Total RNA was isolated from bovine mammary gland tissue samples from the S. aureus-induced mastitis group and controls. miRNAs were analyzed using Solexa sequencing and bioinformatics processing for the experimental group and control group. Two miRNA libraries were constructed respectively. A total of 370 known bovine miRNAs and 341 novel mi RNAs were detected for the S. aureus and 358 known bovine miRNAs and 232 novel miRNAs for control groups. A total of 77 miRNAs in the S. aureus group showed significant differences compared to the control group. GO (Gene Ontology) analysis showed these target genes were involved in the regulation of cells, binding, etc., while KEGG (Kyoto Encyclopedia of Genes and Genomes) analysis showed that these genes were enriched in endocytosis, and olfactory transduction pathways involved in cancer. These results provide an experimental basis to reveal the cause and regulatory mechanism of mastitis and also suggest the potential of miRNAs to serve as biomarkers for the diagnosis of mastitis in dairy cows.

Indexed as

Gene Expression ProfilingAnimalsBiomarkersCattleDNA, BacterialFemaleGene LibraryMammary Glands, AnimalMastitis, BovineMicroRNAsModels, BiologicalReal-Time Polymerase Chain ReactionSequence Analysis, RNAStaphylococcus aureusBiomarkersDNA, BacterialMicroRNAs

Identifiers

PMID25749476
PMCPMC4394461
OpenAlexW1998018670

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.