Evidence map›Paper›PMID 25749039›Full record

ArticleOncotarget2015

Recurrent SKIL-activating rearrangements in ETS-negative prostate cancer.

Matti Annala, Kati Kivinummi, Joonas Tuominen, Serdar Karakurt, Kirsi Granberg, Leena Latonen, Antti Ylipää, Liisa Sjöblom, Pekka Ruusuvuori, Outi Saramäki and 7 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
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  6. Androgen-Driven Fusion Genes and Chimeric Transcripts in Prostate Cancer.Frontiers in cell and developmental biology · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Matti AnnalaInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Kati KivinummiInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Joonas TuominenInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Serdar KarakurtInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Kirsi GranbergInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Leena LatonenInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Antti YlipääInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Liisa SjöblomInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Pekka RuusuvuoriInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Outi SaramäkiInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Kirsi M KaukoniemiInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Olli Yli-HarjaInstitute of Biosciences and Medical Technology - BioMediTech, Tampere University of Technology, Tampere, Finland.
Robert L VessellaDepartment of Urology, University of Washington, Seattle, WA, USA.
Teuvo L J TammelaDepartment of Urology, Tampere University Hospital and Medical School, University of Tampere, Tampere, Finland.
Wei ZhangDepartment of Pathology, University of Texas M.D. Anderson Cancer Center, Houston, TX, USA.
Tapio VisakorpiInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Matti NykterInstitute of Biosciences and Medical Technology - BioMediTech, University of Tampere, Tampere, Finland.
Tampere University · FITampere University · FITampere University Hospital · FIFimlab (Finland) · FIThe University of Texas MD Anderson Cancer Center · USUniversity of Washington · US

Funding

Center for Systems Analysis of the Cancer RegulomeU24CA143835 · NCI · INSTITUTE FOR SYSTEMS BIOLOGY · PI SHMULEVICH, ILYA · 2009 to 2016
$10.6M
NCI NIH HHS U24 CA143835NCI NIH HHS U24CA143835
6 · The paper itself

Abstract

Prostate cancer is the third most common cause of male cancer death in developed countries, and one of the most comprehensively characterized human cancers. Roughly 60% of prostate cancers harbor gene fusions that juxtapose ETS-family transcription factors with androgen regulated promoters. A second subtype, characterized by SPINK1 overexpression, accounts for 15% of prostate cancers. Here we report the discovery of a new prostate cancer subtype characterized by rearrangements juxtaposing the SMAD inhibitor SKIL with androgen regulated promoters, leading to increased SKIL expression. SKIL fusions were found in 6 of 540 (1.1%) prostate cancers and 1 of 27 (3.7%) cell lines and xenografts. 6 of 7 SKIL-positive cancers were negative for ETS overexpression, suggesting mutual exclusivity with ETS fusions. SKIL knockdown led to growth arrest in PC-3 and LNCaP cell line models of prostate cancer, and its overexpression led to increased invasiveness in RWPE-1 cells. The role of SKIL as a prostate cancer oncogene lends support to recent studies on the role of TGF-β signaling as a rate-limiting step in prostate cancer progression. Our findings highlight SKIL as an oncogene and potential therapeutic target in 1-2% of prostate cancers, amounting to an estimated 10,000 cancer diagnoses per year worldwide.

Indexed as

AnimalsCell Line, TumorCohort StudiesGene Knockdown TechniquesGene RearrangementHeterograftsHumansIntracellular Signaling Peptides and ProteinsMaleMiceMiddle AgedProstatic NeoplasmsProto-Oncogene ProteinsProto-Oncogene Proteins c-etsTranscriptomeTransfectionIntracellular Signaling Peptides and ProteinsProto-Oncogene ProteinsProto-Oncogene Proteins c-etsSKIL protein, humanfusion geneprostate cancersequencingSKIL

Identifiers

PMID25749039
PMCPMC4467434
OpenAlexW2137655676

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.