ArticleNature biotechnology2015
Quality score compression improves genotyping accuracy.
Article in Nature biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
26 citing papers in PubMed.
- Incorporating indel channels into average-case analysis of seed-chain-extend.Bioinformatics (Oxford, England) · 2026Article
- zDUR: reference-free FASTQ compressor with high compression ratio and speed.BMC bioinformatics · 2026Article
- FastqCA: an effective FASTQ compressor through 2D spatial redundancy reduction.Frontiers in genetics · 2026Article
- PQSDC: a parallel lossless compressor for quality scores data via sequences partition and run-length prediction mapping.Bioinformatics (Oxford, England) · 2024Article
- Image-centric compression of protein structures improves space savings.BMC bioinformatics · 2023Article
- Navigating bottlenecks and trade-offs in genomic data analysis.Nature reviews. Genetics · 2023Review
- Reference-free lossless compression of nanopore sequencing reads using an approximate assembly approach.Scientific reports · 2023Article
- The Sequence Read Archive: a decade more of explosive growth.Nucleic acids research · 2022Article
- IonCRAM: a reference-based compression tool for ion torrent sequence files.BMC bioinformatics · 2020Article
- Performance evaluation of lossy quality compression algorithms for RNA-seq data.BMC bioinformatics · 2020Article
- Better quality score compression through sequence-based quality smoothing.BMC bioinformatics · 2019Article
- The Terabase Search Engine: a large-scale relational database of short-read sequences.Bioinformatics (Oxford, England) · 2019Article
- Metagenomic binning through low-density hashing.Bioinformatics (Oxford, England) · 2019Article
- CALQ: compression of quality values of aligned sequencing data.Bioinformatics (Oxford, England) · 2018Article
- PhredEM: a phred-score-informed genotype-calling approach for next-generation sequencing studies.Genetic epidemiology · 2017Article
- Effect of lossy compression of quality scores on variant calling.Briefings in bioinformatics · 2017Article
- Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes.Genome research · 2017Article
- A privacy-preserving solution for compressed storage and selective retrieval of genomic data.Genome research · 2016Article
- Fast genotyping of known SNPs through approximate k-mer matching.Bioinformatics (Oxford, England) · 2016Article
- Towards precision medicine.Nature reviews. Genetics · 2016Review
Corrections and comments
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Authors and funding
4 authors.
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Abstract
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.