Evidence map›Paper›PMID 25748437›Full record

ArticleOmics : a journal of integrative biology2015

Comprehensive proteomics analysis of glycosomes from Leishmania donovani.

Mahendra D Jamdhade, Harsh Pawar, Sandip Chavan, Gajanan Sathe, P K Umasankar, Kiran N Mahale, Tanwi Dixit, Anil K Madugundu, T S Keshava Prasad, Harsha Gowda and 2 more

Open access · greenAbstract read
In one paragraph

Article in Omics : a journal of integrative biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. LeishMANIAdb: a comparative resource for Leishmania proteins.Database : the journal of biological databases and curation · 2023
    Article
  5. Review
  6. Article
  7. mBio · 2020
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Integrated genomic and metabolomic profiling of ISC1, an emerging Leishmania donovani population in the Indian subcontinent.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2018
    Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Mahendra D Jamdhade1 National Centre for Cell Science , Pune, India .
Harsh Pawar
Sandip Chavan
Gajanan Sathe
P K Umasankar
Kiran N Mahale
Tanwi Dixit
Anil K Madugundu
T S Keshava Prasad
Harsha Gowda
Akhilesh Pandey
Milind S Patole
National Centre for Cell Science · INInstitute of Bioinformatics · INManipal Academy of Higher Education · INJohns Hopkins University · USRajiv Gandhi University of Health Sciences · IN

Funding

Wellcome Trust
6 · The paper itself

Abstract

Leishmania donovani is a kinetoplastid protozoan that causes a severe and fatal disease kala-azar, or visceral leishmaniasis. L. donovani infects human host after the phlebotomine sandfly takes a blood meal and resides within the phagolysosome of infected macrophages. Previous studies on host-parasite interactions have not focused on Leishmania organelles and the role that they play in the survival of this parasite within macrophages. Leishmania possess glycosomes that are unique and specialized subcellular microbody organelles. Glycosomes are known to harbor most peroxisomal enzymes and, in addition, they also possess nine glycolytic enzymes. In the present study, we have carried out proteomic profiling using high resolution mass spectrometry of a sucrose density gradient-enriched glycosomal fraction isolated from L. donovani promastigotes. This study resulted in the identification of 4022 unique peptides, leading to the identification of 1355 unique proteins from a preparation enriched in L. donovani glycosomes. Based on protein annotation, 566 (41.8%) were identified as hypothetical proteins with no known function. A majority of the identified proteins are involved in metabolic processes such as carbohydrate, lipid, and nucleic acid metabolism. Our present proteomic analysis is the most comprehensive study to date to map the proteome of L. donovani glycosomes.

Indexed as

ProteomeProteomicsAmino Acid SequenceCell FractionationChromatography, LiquidComputational BiologyGene OntologyHumansLeishmania donovaniLipid MetabolismMetabolic Networks and PathwaysMicrobodiesMolecular Sequence DataProtein Processing, Post-TranslationalProtozoan ProteinsTandem Mass SpectrometryProteomeProtozoan Proteins

Identifiers

PMID25748437
PMCPMC4356261
OpenAlexW1513777552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.