Evidence map›Paper›PMID 25746988›Full record

ArticleApplied and environmental microbiology2015

Lactococcal 949 group phages recognize a carbohydrate receptor on the host cell surface.

Jennifer Mahony, Walter Randazzo, Horst Neve, Luca Settanni, Douwe van Sinderen

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 39 citations in OpenAlex.

  1. Members of theMicrobial genomics · 2026
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  13. Vgas: A Viral Genome Annotation System.Frontiers in microbiology · 2019
    Article
  14. TheFrontiers in microbiology · 2019
    Article
  15. Targeting mechanisms of tailed bacteriophages.Nature reviews. Microbiology · 2018
    Review
  16. Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Jennifer MahonySchool of Microbiology, University College Cork, Cork, Ireland.
Walter RandazzoSchool of Microbiology, University College Cork, Cork, Ireland Department of Agricultural and Forest Science, University of Palermo, Palermo, Italy.
Horst NeveDepartment of Microbiology and Biotechnology, Max Rubner-Institut, Kiel, Germany.
Luca SettanniDepartment of Agricultural and Forest Science, University of Palermo, Palermo, Italy.
Douwe van SinderenSchool of Microbiology, University College Cork, Cork, Ireland Alimentary Pharmabiotic Centre, University College Cork, Cork, Ireland d.vansinderen@ucc.ie.
University College Cork · IEUniversity of Palermo · ITMax Rubner Institut · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lactococcal bacteriophages represent one of the leading causes of dairy fermentation failure and product inconsistencies. A new member of the lactococcal 949 phage group, named WRP3, was isolated from cheese whey from a Sicilian factory in 2011. The genome sequence of this phage was determined, and it constitutes the largest lactococcal phage genome currently known, at 130,008 bp. Detailed bioinformatic analysis of the genomic region encoding the presumed initiator complex and baseplate of WRP3 has aided in the functional assignment of several open reading frames (ORFs), particularly that for the receptor binding protein required for host recognition. Furthermore, we demonstrate that the 949 phages target cell wall phospho-polysaccharides as their receptors, accounting for the specificity of the interactions of these phages with their lactococcal hosts. Such information may ultimately aid in the identification of strains/strain blends that do not present the necessary saccharidic target for infection by these problematic phages.

Indexed as

BacteriophagesCarbohydrate MetabolismCarbohydratesGenome, ViralHost SpecificityLactococcus lactisMolecular Sequence DataProtein BindingReceptors, VirusCarbohydratesReceptors, Virus

Identifiers

PMID25746988
PMCPMC4407214
OpenAlexW2031347150

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.