Evidence map›Paper›PMID 25744034›Full record

ArticleNature communications2015

Stereochemical bias introduced during RNA synthesis modulates the activity of phosphorothioate siRNAs.

Hartmut Jahns, Martina Roos, Jochen Imig, Fabienne Baumann, Yuluan Wang, Ryan Gilmour, Jonathan Hall

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 92 citations in OpenAlex.

  1. Chalcogen-modified Nucleic Acid Analogues.Current medicinal chemistry · 2026
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  16. A P(V) platform for oligonucleotide synthesis.Science (New York, N.Y.) · 2021
    Article
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  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Hartmut JahnsDepartment of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg-4, CH-8093 Zürich, Switzerland.
Martina RoosDepartment of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg-4, CH-8093 Zürich, Switzerland.
Jochen ImigDepartment of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg-4, CH-8093 Zürich, Switzerland.
Fabienne BaumannDepartment of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg-4, CH-8093 Zürich, Switzerland.
Yuluan WangDepartment of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg-4, CH-8093 Zürich, Switzerland.
Ryan GilmourInstitute for Organic Chemistry, Westfälische Wilhelms-Universität Münster, D-48149 Münster, Germany.
Jonathan HallDepartment of Chemistry and Applied Biosciences, ETH Zürich, Vladimir-Prelog-Weg-4, CH-8093 Zürich, Switzerland.
ETH Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An established means of improving the pharmacokinetics properties of oligoribonucleotides (ORNs) is to exchange their phosphodiester linkages for phosphorothioates (PSs). However, this strategy has not been pursued for small interfering RNAs (siRNAs), possibly because of sporadic reports that PS siRNAs show reduced inhibitory activity. The PS group is chiral at phosphorous (Rp/Sp centres), and conventional solid-phase synthesis of PS ORNs produces a population of diastereoisomers. Here we show that the choice of the activating agent for the synthesis of a PS ORN influences the Rp/Sp ratio of PS linkages throughout the strand. Furthermore, PS siRNAs composed of ORNs with a higher fraction of Rp centres show greater resistance to nucleases in serum and are more effective inhibitors in cells than their Sp counterparts. The finding that a stereochemically biased population of ORN diastereoisomers can be synthesized and exploited pharmacologically is important because uniform PS modification of siRNAs may provide a useful compromise of their pharmacokinetics and pharmacodynamics properties in RNAi therapeutics.

Indexed as

RNA InterferenceBlotting, NorthernHeLa CellsHumansIsomerismLuciferasesMolecular StructurePhosphorothioate OligonucleotidesRNARNA, Small InterferingLuciferasesPhosphorothioate OligonucleotidesRNARNA, Small Interfering

Identifiers

PMID25744034
PMCPMC4366519
OpenAlexW1964272339

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.