Evidence map›Paper›PMID 25743039›Full record

ArticleProtoplasma2015

Expression of developmentally regulated plasma membrane polypeptide (DREPP2) in rice root tip and interaction with Ca(2+)/CaM complex and microtubule.

Nana Yamada, Cattarin Theerawitaya, Hakuto Kageyama, Suriyan Cha-Um, Teruhiro Takabe

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Protoplasma, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. A Calmodulin-Like Gene (Frontiers in plant science · 2021
    Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Nana YamadaPlant Physiology and Biochemistry Laboratory, BIOTEC, Pathumthani, 12120, Thailand.
Cattarin TheerawitayaPlant Physiology and Biochemistry Laboratory, BIOTEC, Pathumthani, 12120, Thailand.
Hakuto KageyamaGraduate School of Environmental and Human Sciences, Meijo University, Nagoya, 468-8502, Japan.
Suriyan Cha-UmPlant Physiology and Biochemistry Laboratory, BIOTEC, Pathumthani, 12120, Thailand.
Teruhiro TakabeGraduate School of Environmental and Human Sciences, Meijo University, Nagoya, 468-8502, Japan. takabe@meijo-u.ac.jp.
National Center for Genetic Engineering and Biotechnology · THMeijo University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cytoplasmic free Ca(2+) could play an important role for salt tolerance in rice root (Oryza sativa L.). Here, we compared the expression profiles of two putative developmentally regulated plasma membrane polypeptides (DREPP1 and DREPP2) in rice roots of salt-tolerant cv. Pokkali and salt-sensitive cv. IR29. The messenger RNA (mRNA) for OsDREPP1 could be detected in all parts of root and did not change upon salt stress, whereas the mRNA for OsDREPP2 was detected only in root tips. The transcript level of OsDREPP2 first disappeared upon salt stress, then recovered in Pokkali, but not recovered in IR29. The gene-encoding OsDREPP2 was cloned from cv. Pokkali and expressed in Escherichia coli, and its biochemical properties were studied. It was found that OsDREPP2 is a Ca(2+)-binding protein and binds also to calmodulin (CaM) as well as microtubules. The mutation of Trp4 and Phe16 in OsDREPP2 to Ala decreased the binding of DREPP2 to Ca(2+)/CaM complex, indicating the N-terminal basic domain is involved for the binding. The binding of OsDREPP2 to microtubules was inhibited by Ca(2+)/CaM complex, while the binding of double-mutant OsDREPP2 protein to microtubules was not inhibited by Ca(2+)/CaM complex. We propose that CaM inhibits the binding of DREPP2 to cortical microtubules, causes the inhibition of microtubule depolymerization, and enhances the cell elongation.

Indexed as

Salt ToleranceCalciumCalmodulinCell ShapeCloning, MolecularGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGenotypeMembrane ProteinsMeristemMicrotubulesMutationOryzaPhenotypePlant ProteinsPlants, Genetically ModifiedCalciumCalmodulinMembrane Proteinsp16 protein, plantp17 protein, plantPlant ProteinsRNA, MessengerRNA, PlantCa2+-binding proteinCalmodulinCell elongationDREPPMicrotubuleOryza sativaSalt stress

Identifiers

PMID25743039
OpenAlexW1982072267

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.