Evidence map›Paper›PMID 25742438›Full record

ArticleJournal of visualized experiments : JoVE2015

Laser capture microdissection--a demonstration of the isolation of individual dopamine neurons and the entire ventral tegmental area.

Evangel Kummari, Shirley X Guo-Ross, Jeffrey B Eells

Open access · bronzeAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Mosaicism in Cutaneous Disorders.Annual review of genetics · 2017
    Review
  11. Article
  12. MicroRNA Profiling Reveals Marker of Motor Neuron Disease in ALS Models.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2017
    Article
  13. Single Cell Isolation and Analysis.Frontiers in cell and developmental biology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Evangel KummariDepartment of Basic Sciences, Mississippi State University College of Veterinary Medicine.
Shirley X Guo-RossDepartment of Basic Sciences, Mississippi State University College of Veterinary Medicine.
Jeffrey B EellsDepartment of Basic Sciences, Mississippi State University College of Veterinary Medicine; eells@cvm.msstate.edu.
Mississippi State University · US

Funding

Regulation and function of Nurr1 in adult nigrostriatal dopamine neuronsR21NS058375 · NINDS · MISSISSIPPI STATE UNIVERSITY · PI EELLS, JEFFREY B · 2008 to 2009
$306k
Molecular biology of mesocortical and mesoaccumbens dopamine neuronsR15MH084209 · NIMH · MISSISSIPPI STATE UNIVERSITY · PI EELLS, JEFFREY B · 2009 to 2009
$215k
NIMH NIH HHS 1R15MH084209-01A1NIMH NIH HHS R15 MH084209NINDS NIH HHS R21 NS058375NINDS NIH HHS R21NS058375-01A2
6 · The paper itself

Abstract

Laser capture microdissection (LCM) is used to isolate a concentrated population of individual cells or precise anatomical regions of tissue from tissue sections on a microscope slide. When combined with immunohistochemistry, LCM can be used to isolate individual cells types based on a specific protein marker. Here, the LCM technique is described for collecting a specific population of dopamine neurons directly labeled with tyrosine hydroxylase immunohistochemistry and for isolation of the dopamine neuron containing region of the ventral tegmental area using indirect tyrosine hydroxylase immunohistochemistry on a section adjacent to those used for LCM. An infrared (IR) capture laser is used to both dissect individual neurons as well as the ventral tegmental area off glass slides and onto an LCM cap for analysis. Complete dehydration of the tissue with 100% ethanol and xylene is critical. The combination of the IR capture laser and the ultraviolet (UV) cutting laser is used to isolate individual dopamine neurons or the ventral tegmental area when using PEN membrane slides. A PEN membrane slide has significant advantages over a glass slide as it offers better consistency in capturing and collecting cells, is faster collecting large pieces of tissue, is less reliant on dehydration and results in complete removal of the tissue from the slide. Although removal of large areas of tissue from a glass slide is feasible, it is considerably more time consuming and frequently leaves some residual tissue behind. Data shown here demonstrate that RNA of sufficient quantity and quality can be obtained using these procedures for quantitative PCR measurements. Although RNA and DNA are the most commonly isolated molecules from tissue and cells collected with LCM, isolation and measurement of microRNA, protein and epigenetic changes in DNA can also benefit from the enhanced anatomical and cellular resolution obtained using LCM.

Indexed as

AnimalsDopaminergic NeuronsImmunohistochemistryLaser Capture MicrodissectionMiceVentral Tegmental Area

Identifiers

PMID25742438
PMCPMC4354571
OpenAlexW2076346277

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.