Evidence map›Paper›PMID 25741586›Full record

ArticleBiochemistry2015

Unlike catalyzing error-free bypass of 8-oxodGuo, DNA polymerase λ is responsible for a significant part of Fapy·dG-induced G → T mutations in human cells.

Paritosh Pande, Kazuhiro Haraguchi, Yu-Lin Jiang, Marc M Greenberg, Ashis K Basu

Abstract read
In one paragraph

Article in Biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. 8-Oxoguanine: A Lesion, an Epigenetic Mark, or a Molecular Signal?International journal of molecular sciences · 2025
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Aberrant Repair of 8-Oxoguanine in Short DNA Bulges.Doklady. Biochemistry and biophysics · 2023
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Synthesis of Oligonucleotides Containing the NChemistry (Weinheim an der Bergstrasse, Germany) · 2020
    Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Paritosh Pande†Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269, United States.
Kazuhiro Haraguchi‡Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States.
Yu-Lin Jiang‡Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States.
Marc M Greenberg‡Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States.
Ashis K Basu†Department of Chemistry, University of Connecticut, Storrs, Connecticut 06269, United States.
Johns Hopkins University · USUniversity of Connecticut · US

Funding

Translational Research Central ServicesP30CA006973 · NCI · JOHNS HOPKINS UNIVERSITY · PI Rosalie Wollett · 1985 to 2026
$208.6M
Genotoxicity and Repair of Tobacco-Specific Nitrosamine DNA AdductsR01ES021762 · NIEHS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI SPRATT, THOMAS E · 2012 to 2022
$3.7M
BIOLOGICAL EFFECTS OF DNA ADDUCTS FORMED BY NITROPYRENESR01ES009127 · NIEHS · UNIVERSITY OF CONNECTICUT STORRS · PI BASU, ASHIS K, SUO, ZUCAI · 1998 to 2014
$3.5M
FORMAMIDOPYRIMIDINE LESIONS--NUCLEIC ACID STRUCT/FUNCTR01CA074954 · NCI · JOHNS HOPKINS UNIVERSITY · PI GREENBERG, MARC M · 1997 to 2006
$1.3M
Biological Effects of DNA Adducts Formed by Nitroaromatic CompoundsR56ES009127 · NIEHS · UNIVERSITY OF CONNECTICUT STORRS · PI BASU, ASHIS K, SUO, ZUCAI · 2009 to 2009
$393k
NCI NIH HHS CA-74954NCI NIH HHS P30 CA006973NCI NIH HHS R01 CA074954NIEHS NIH HHS ES021762NIEHS NIH HHS ES09127NIEHS NIH HHS R01 ES009127NIEHS NIH HHS R01 ES021762NIEHS NIH HHS R56 ES009127
6 · The paper itself

Abstract

8-OxodGuo and Fapy·dG induced 10-22% mutations, predominantly G → T transversions, in human embryonic kidney 293T cells in four TG*N sequence contexts, where N = C, G, A, or T. siRNA knockdown of pol λ resulted in 34 and 55% increases in the level of mutations in the progeny from the 8-oxodGuo construct in the TG*T and TG*G sequences, respectively, suggesting that pol λ is involved in error-free bypass of 8-oxodGuo. For Fapy·dG, in contrast, the level of G → T mutations was reduced by 27 and 46% in the TG*T and TG*G sequences, respectively, suggesting that pol λ is responsible for a significant fraction of Fapy·dG-induced G → T mutations.

Indexed as

Point MutationCatalysisDNADNA Polymerase betaGuanosine TriphosphateHumansThymine Nucleotides8-hydroxyguanosine triphosphateDNADNA Polymerase betaDNA polymerase beta2Guanosine TriphosphateThymine Nucleotides

Identifiers

PMID25741586
PMCPMC4630799
OpenAlexW2325188654

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.