Evidence map›Paper›PMID 25740956›Full record

ArticleThe Journal of infectious diseases2015

HLA Class I Supertype Associations With Clinical Outcome of Secondary Dengue Virus Infections in Ethnic Thais.

Sasijit Vejbaesya, Rungrot Thongpradit, Siripen Kalayanarooj, Komon Luangtrakool, Panpimon Luangtrakool, Robert V Gibbons, Duangporn Srinak, Somporn Ngammthaworn, Kusuma Apisawes, In-Kyu Yoon and 9 more

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
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  12. MiDAS-Meaningful Immunogenetic Data at Scale.PLoS computational biology · 2021
    Article
  13. Article
  14. HLA-B*44 and C*01 Prevalence Correlates with Covid19 Spreading across Italy.International journal of molecular sciences · 2020
    Observational
  15. Development of Peptide Vaccines in Dengue.Current pharmaceutical design · 2018
    Review
  16. Article
  17. Observational
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  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Sasijit VejbaesyaDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
Rungrot ThongpraditDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
Siripen KalayanaroojQueen Sirikit National Institute of Child Health.
Komon LuangtrakoolDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
Panpimon LuangtrakoolDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
Robert V GibbonsDepartment of Virology, Armed Forces Research Institute of Medical Science, Bangkok, Thailand.
Duangporn SrinakDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
Somporn NgammthawornDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
Kusuma ApisawesDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
In-Kyu YoonDepartment of Virology, Armed Forces Research Institute of Medical Science, Bangkok, Thailand.
Stephen J ThomasViral Diseases Branch, Walter Reed Army Institute of Research, Silver Spring, Maryland.
Richard G JarmanViral Diseases Branch, Walter Reed Army Institute of Research, Silver Spring, Maryland.
Anon SrikiakthachornDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Medical School, Worcester.
Sharone GreenDivision of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Medical School, Worcester.
Dasnayanee ChandanayingyongDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University.
Sangshin ParkCenter for International Health Research, Rhode Island Hospital, The Warren Alpert Medical School of Brown University.
Jennifer FriedmanCenter for International Health Research, Rhode Island Hospital, The Warren Alpert Medical School of Brown University.
Alan L RothmanInstitute for Immunology and Informatics, University of Rhode Island, Providence.
Henry A F StephensDepartment of Transfusion Medicine, Faculty of Medicine, Siriraj Hospital, Mahidol University UCL Centre for Nephrology and Anthony Nolan Laboratories, Royal Free NHS Foundation Trust, Royal Free Hospital, London, United Kingdom.

Funding

VIRAL DETERMINANTS OF SEVERE DENGUE DISEASEP01AI034533 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI ROTHMAN, ALAN L · 1994 to 2022
$42.0M
NIAID NIH HHS P01 AI034533NIAID NIH HHS P01AI34533
6 · The paper itself

Abstract

backgroundHuman leukocyte antigen (HLA) supertypes are groups of functionally related alleles that present structurally similar antigens to the immune system.

objectivesTo analyze HLA class I supertype associations with clinical outcome in hospitalized Thai children with acute dengue illness.

methodsSeven hundred sixty-two patients and population-matched controls recruited predominantly in Bangkok were HLA-A and -B typed. HLA supertype frequencies were compared and tested for significant dengue disease associations using logistic regression analyses. Multivariable models were built by conducting forward stepwise selection procedures.

resultsIn the final logistic regression model, the HLA-B44 supertype was protective against dengue hemorrhagic fever (DHF) in secondary infections (odds ratio [OR] = 0.46, 95% confidence interval [CI], .30-.72), while the HLA-A02 supertype (OR = 1.92, 95% CI, 1.30-2.83) and the HLA-A01/03 supertype (OR = 3.01, 95% CI, 1.01-8.92) were associated with susceptibility to secondary dengue fever. The B07 supertype was associated with susceptibility to secondary DHF in the univariate analysis (OR = 1.60, 95% CI, 1.05-2.46), whereas that was not retained in the final model.

conclusionsAs the HLA-B44 supertype is predicted to target conserved epitopes in dengue, our results suggest that B44 supertype-restricted immune responses to highly conserved regions of the dengue proteome may protect against secondary DHF.

Indexed as

Dengue VirusEthnicityAdolescentCase-Control StudiesChildChild, PreschoolCohort StudiesGenes, MHC Class IGenetic Predisposition to DiseaseHumansLogistic ModelsMultivariate AnalysisOdds RatioSevere DengueThailandassociationsB44class IdengueHLAinfectionssecondarysupertypeThais

Identifiers

PMID25740956
PMCPMC4548457

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.