Evidence map›Paper›PMID 25740485›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2015

In vivo modulation and quantification of microRNAs during axolotl tail regeneration.

Jami R Erickson, Karen Echeverri

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jami R EricksonDepartment of Genetics, Cell Biology and Development, Stem Cell Institute, University of Minnesota, 6-160 Jackson hall, 321 Church St. SE, Minneapolis, MN, 55455, USA.
Karen Echeverri
University of Minnesota · US

Funding

Stem Cell Biology Training ProgramT32HD060536 · NICHD · UNIVERSITY OF MINNESOTA · PI KAUFMAN, DAN S. · 2010 to 2014
$779k
Stem Cell Biology Training ProgramT32GM113846 · NIGMS · UNIVERSITY OF MINNESOTA · PI PERLINGEIRO, RITA C. R. · 2015 to 2019
$712k
NICHD NIH HHS T32 HD060536NICHD NIH HHS T32 HD060536 04NIGMS NIH HHS T32 GM113846
6 · The paper itself

Abstract

The ability to regenerate diseased, injured, or missing complex tissue is widespread throughout lower vertebrates and invertebrates; however, our knowledge of the molecular mechanisms that regulate this amazing ability is still in its infancy. Many recent papers have shown important roles for microRNAs in regulating regeneration in a number of species. The ability to detect and quantify miRNA expression fluctuations at a single cell level in vivo in different cell types during processes like regeneration is very informative. In this chapter, we describe how to use a dual-fluorescent green fluorescent protein (GFP)-reporter/monomeric red fluorescent protein (mRFP)-sensor (DFRS) plasmid to quantitate the dynamics of specific miRNAs over time following miRNA mimic injection as well as during regeneration. In this bicistronic vector, the mRFP allows for verification of miRNA expression, while the GFP functions as an internal control to normalize miRNA expression and thus obtain quantitative results. In addition, we demonstrate how this technique revealed dynamic miR-23a expression and function during tail regeneration.

Indexed as

Ambystoma mexicanumAnimalsElectroporationGene Expression ProfilingGreen Fluorescent ProteinsInjectionsLuminescent ProteinsMicroRNAsPlasmidsRed Fluorescent ProteinRegenerationTailGreen Fluorescent ProteinsLuminescent ProteinsMicroRNAsRed Fluorescent Protein

Identifiers

PMID25740485
PMCPMC5896293
OpenAlexW153807433

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.