Evidence map›Paper›PMID 25739705›Full record

ArticleScientific reports2015

Prognostic impact of HOTAIR expression is restricted to ER-negative breast cancers.

Yesim Gökmen-Polar, I Tudor Vladislav, Yaseswini Neelamraju, Sarath C Janga, Sunil Badve

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed, 2 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 2 syntheses or guidelines pooled it, 67 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Review
  6. Article
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  16. Frontiers in oncology · 2021
    Article
  17. Article
  18. HOX Transcript Antisense RNANon-coding RNA · 2020
    Article
  19. Long Non-Coding RNACancers · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Yesim Gökmen-PolarDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN.
I Tudor VladislavDepartment of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN.
Yaseswini NeelamrajuDepartment of Biohealth Informatics, School of Informatics and Computing, IUPUI, Indianapolis, IN.
Sarath C JangaDepartment of Biohealth Informatics, School of Informatics and Computing, IUPUI, Indianapolis, IN.
Sunil Badve1] Department of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN [2] Department of Medicine, Indiana University School of Medicine, Indianapolis, IN [3] Indiana University Melvin and Bren Simon Cancer Center, Indianapolis, IN.
Indiana University – Purdue University Indianapolis · USIndiana University School of Medicine

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Expression of HOX transcript antisense intergenic RNA (HOTAIR), a large intergenic noncoding RNA (lincRNA), has been described as a metastases-associated lincRNA in various cancers including breast, liver and colon cancer cancers. We sought to determine if expression of HOTAIR could be used as a surrogate for assessing nodal metastases and evaluated RNA in situ hybridization (RNA-ISH) assay in a tissue microarray constructed from 133 breast cancer patients. The prognostic value of HOTAIR was further validated in large cohorts using The Cancer Genome Atlas (TCGA) breast cancer subjects. RNA-ISH analysis was successful in 94 cases (17% cases scored 0, 32.9% scored 1, 30.8% scored 2, and 19.1% scored 3). The expression of HOTAIR did not correlate with nodal metastasis regardless of the scoring intensity or with other study parameters (age, tumor size and grade, expression status). Further analysis of TCGA dataset showed that HOTAIR expression was lower in ductal carcinomas but higher in ER-negative tumors. Overexpression of HOTAIR was not associated with nodal metastases or prognosis in ER-positive patients. Its function as a poor prognostic indicator in ER-negative patients was restricted to node-positive patients. HOTAIR appears to be a marker for lymphatic metastases rather than hematogenous metastases in ER-negative patients.

Indexed as

Gene ExpressionBiomarkers, TumorBreast NeoplasmsCohort StudiesDatasets as TopicErb-b2 Receptor Tyrosine KinasesFemaleHumansKaplan-Meier EstimateLymphatic MetastasisNeoplasm GradingPrognosisReceptors, EstrogenRNA, Long NoncodingTumor BurdenBiomarkers, TumorErb-b2 Receptor Tyrosine KinasesHOTAIR long untranslated RNA, humanReceptors, EstrogenRNA, Long Noncoding

Identifiers

PMID25739705
PMCPMC4350112
OpenAlexW2086601136

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.