Evidence map›Paper›PMID 25739701›Full record

ArticlePlant physiology2015

Reducing isozyme competition increases target fatty acid accumulation in seed triacylglycerols of transgenic Arabidopsis.

Harrie van Erp, Jay Shockey, Meng Zhang, Neil D Adhikari, John Browse

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 65 citations in OpenAlex.

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  15. Engineering the stereoisomeric structure of seed oil to mimic human milk fat.Proceedings of the National Academy of Sciences of the United States of America · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Harrie van ErpInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340 (H.v.E., N.D.A., J.B.);Southern Regional Research Center, United States Department of Agriculture-Agricultural Research Service, New Orleans, Louisiana 70124 (J.S.); andDepartment of Plant Biology, Michigan State University, East Lansing, Michigan 48824-1312 (M.Z.).
Jay ShockeyInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340 (H.v.E., N.D.A., J.B.);Southern Regional Research Center, United States Department of Agriculture-Agricultural Research Service, New Orleans, Louisiana 70124 (J.S.); andDepartment of Plant Biology, Michigan State University, East Lansing, Michigan 48824-1312 (M.Z.).
Meng ZhangInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340 (H.v.E., N.D.A., J.B.);Southern Regional Research Center, United States Department of Agriculture-Agricultural Research Service, New Orleans, Louisiana 70124 (J.S.); andDepartment of Plant Biology, Michigan State University, East Lansing, Michigan 48824-1312 (M.Z.).
Neil D AdhikariInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340 (H.v.E., N.D.A., J.B.);Southern Regional Research Center, United States Department of Agriculture-Agricultural Research Service, New Orleans, Louisiana 70124 (J.S.); andDepartment of Plant Biology, Michigan State University, East Lansing, Michigan 48824-1312 (M.Z.).
John BrowseInstitute of Biological Chemistry, Washington State University, Pullman, Washington 99164-6340 (H.v.E., N.D.A., J.B.);Southern Regional Research Center, United States Department of Agriculture-Agricultural Research Service, New Orleans, Louisiana 70124 (J.S.); andDepartment of Plant Biology, Michigan State University, East Lansing, Michigan 48824-1312 (M.Z.) jab@wsu.edu.
Washington State University · USAgricultural Research Service · USMichigan State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One goal of green chemistry is the production of industrially useful fatty acids (FAs) in crop plants. We focus on hydroxy fatty acids (HFAs) and conjugated polyenoic FAs (α-eleostearic acids [ESAs]) using Arabidopsis (Arabidopsis thaliana) as a model. These FAs are found naturally in seed oils of castor (Ricinus communis) and tung tree (Vernicia fordii), respectively, and used for the production of lubricants, nylon, and paints. Transgenic oils typically contain less target FA than that produced in the source species. We hypothesized that competition between endogenous and transgenic isozymes for substrates limits accumulation of unique FAs in Arabidopsis seeds. This hypothesis was tested by introducing a mutation in Arabidopsis diacylglycerol acyltransferase1 (AtDGAT1) in a line expressing castor FA hydroxylase and acyl-Coenzyme A:RcDGAT2 in its seeds. This led to a 17% increase in the proportion of HFA in seed oil. Expression of castor phospholipid:diacylglycerol acyltransferase 1A in this line increased the proportion of HFA by an additional 12%. To determine if our observations are more widely applicable, we investigated if isozyme competition influenced production of ESA. Expression of tung tree FA conjugase/desaturase in Arabidopsis produced approximately 7.5% ESA in seed lipids. Coexpression of VfDGAT2 increased ESA levels to approximately 11%. Overexpression of VfDGAT2 combined with suppression of AtDGAT1 increased ESA accumulation to 14% to 15%. Our results indicate that isozyme competition is a limiting factor in the engineering of unusual FAs in heterologous plant systems and that reduction of competition through mutation and RNA suppression may be a useful component of seed metabolic engineering strategies.

Indexed as

AleuritesArabidopsisArabidopsis ProteinsBiosynthetic PathwaysDiacylglycerol O-AcyltransferaseFatty AcidsHomozygoteIsoenzymesPlants, Genetically ModifiedRicinus communisSeedsStereoisomerismSubstrate SpecificityTriglyceridesArabidopsis ProteinsDGAT1 protein, ArabidopsisDiacylglycerol O-AcyltransferaseFatty AcidsIsoenzymesTriglycerides

Identifiers

PMID25739701
PMCPMC4424008
OpenAlexW2084146281

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.