Evidence map›Paper›PMID 25739452›Full record

ArticleMolecular biology of the cell2015

Sec14-nodulin proteins and the patterning of phosphoinositide landmarks for developmental control of membrane morphogenesis.

Ratna Ghosh, Marília K F de Campos, Jin Huang, Seong K Huh, Adam Orlowski, Yuan Yang, Ashutosh Tripathi, Aaron Nile, Hsin-Chieh Lee, Marek Dynowski and 9 more

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
10.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Spontaneous signal generation by an excitable system for cell migration.Frontiers in cell and developmental biology · 2024
    Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Gradients of PI(4,5)PFrontiers in cell and developmental biology · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Single-molecule imaging of PI(4,5)PCommunications biology · 2020
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 6 countries.

Ratna GhoshDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M Health Sciences Center, Texas A&M University, College Station, TX 77843.
Marília K F de CamposCenter for Plant Molecular Biology, Plant Physiology, Universität Tübingen, 72076 Tübingen, Germany.
Jin HuangDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M Health Sciences Center, Texas A&M University, College Station, TX 77843.
Seong K HuhDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M Health Sciences Center, Texas A&M University, College Station, TX 77843.
Adam OrlowskiDepartment of Physics, Tampere University of Technology, FI-33101 Tampere, Finland.
Yuan YangDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843.
Ashutosh TripathiDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M Health Sciences Center, Texas A&M University, College Station, TX 77843.
Aaron NileDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M Health Sciences Center, Texas A&M University, College Station, TX 77843.
Hsin-Chieh LeeCenter for Plant Molecular Biology, Plant Physiology, Universität Tübingen, 72076 Tübingen, Germany.
Marek DynowskiZentrum für Datenverarbeitung, Universität Tübingen, 72074 Tübingen, Germany.
Helen SchäferCenter for Plant Molecular Biology, Plant Physiology, Universität Tübingen, 72076 Tübingen, Germany.
Tomasz RógDepartment of Physics, Tampere University of Technology, FI-33101 Tampere, Finland.
Marta G LeteUnidad de Biofísica (CSIC, UPV/EHU), Departamento de Bioquímica, Universidad del País Vasco, 48940 Leioa, Spain.
Hasna AhyayauchUnidad de Biofísica (CSIC, UPV/EHU), Departamento de Bioquímica, Universidad del País Vasco, 48940 Leioa, Spain Institut de Formation aux Carrieres de Sante de Rabat, 10000 Rabat, Morocco.
Alicia AlonsoUnidad de Biofísica (CSIC, UPV/EHU), Departamento de Bioquímica, Universidad del País Vasco, 48940 Leioa, Spain.
Ilpo VattulainenDepartment of Physics, Tampere University of Technology, FI-33101 Tampere, Finland MEMPHYS-Center for Biomembrane Physics, University of Southern Denmark, DK-5230 Odense M, Denmark.
Tatyana I IgumenovaDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843.
Gabriel SchaafCenter for Plant Molecular Biology, Plant Physiology, Universität Tübingen, 72076 Tübingen, Germany vytas@tamhsc.edu gabriel.schaaf@zmbp.uni-tuebingen.de.
Vytas A BankaitisDepartment of Molecular and Cellular Medicine, College of Medicine, Texas A&M Health Sciences Center, Texas A&M University, College Station, TX 77843 Department of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843 Department of Chemistry, Texas A&M University, College Station, TX 77843 vytas@tamhsc.edu gabriel.schaaf@zmbp.uni-tuebingen.de.
Texas A&M Health Science Center · USUniversity of Tübingen · DETampere University · FIUniversity of the Basque Country · ESTexas A&M University · USZentrum für Datenverarbeitung

Funding

Role of the Phospholipids in Golgi Secretory FunctionR01GM044530 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BANKAITIS, VYTAS A · 1991 to 2019
$5.6M
POLARITY ESTABLISHMENT IN YEASTR01GM062300 · NIGMS · DUKE UNIVERSITY · PI LEW, DANIEL J · 2001 to 2016
$5.0M
NIGMS NIH HHS GM44530NIGMS NIH HHS GM62300NIGMS NIH HHS R01 GM044530NIGMS NIH HHS R01 GM062300
6 · The paper itself

Abstract

Polarized membrane morphogenesis is a fundamental activity of eukaryotic cells. This process is essential for the biology of cells and tissues, and its execution demands exquisite temporal coordination of functionally diverse membrane signaling reactions with high spatial resolution. Moreover, mechanisms must exist to establish and preserve such organization in the face of randomizing forces that would diffuse it. Here we identify the conserved AtSfh1 Sec14-nodulin protein as a novel effector of phosphoinositide signaling in the extreme polarized membrane growth program exhibited by growing Arabidopsis root hairs. The data are consistent with Sec14-nodulin proteins controlling the lateral organization of phosphatidylinositol 4,5-bisphosphate (PtdIns(4,5)P2) landmarks for polarized membrane morphogenesis in plants. This patterning activity requires both the PtdIns(4,5)P2 binding and homo-oligomerization activities of the AtSfh1 nodulin domain and is an essential aspect of the polarity signaling program in root hairs. Finally, the data suggest a general principle for how the phosphoinositide signaling landscape is physically bit mapped so that eukaryotic cells are able to convert a membrane surface into a high-definition lipid-signaling screen.

Indexed as

Amino Acid SequenceArabidopsisArabidopsis ProteinsBinding SitesCell MembraneCell PolarityMolecular Dynamics SimulationMorphogenesisPhosphatidylinositol 4,5-DiphosphatePhospholipid Transfer ProteinsPlant RootsProtein BindingSignal TransductionArabidopsis ProteinsPhosphatidylinositol 4,5-DiphosphatePhospholipid Transfer ProteinsSfh1 protein, Arabidopsis

Identifiers

PMID25739452
PMCPMC4436786
OpenAlexW2146012401

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.