Evidence map›Paper›PMID 25739100›Full record

ArticlePloS one2015

Polymorphisms in microRNA target sites of forkhead box O genes are associated with hepatocellular carcinoma.

Chao Tan, Shun Liu, Shengkui Tan, Xiaoyun Zeng, Hongping Yu, Anhua Li, Chunhua Bei, Xiaoqiang Qiu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed, 1 pooled it
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 1 synthesis or guideline pooled it, 36 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Frontiers in oncology · 2024
    Article
  4. Article
  5. MicroRNAs in Genetic Etiology of Human Diseases.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  6. Clinical Significance of TUBGCP4 Expression in Hepatocellular Carcinoma.Analytical cellular pathology (Amsterdam) · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. FoxO proteins in the nervous system.Analytical cellular pathology (Amsterdam) · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Chao TanDepartment of Epidemiology, School of Public Health, Guangxi Medical University, Nanning, Guangxi, China.
Shun LiuDepartment of Epidemiology, School of Public Health, Guangxi Medical University, Nanning, Guangxi, China.
Shengkui TanDepartment of Epidemiology, School of Public Health, Guilin Medical University, Guilin, Guangxi, China.
Xiaoyun ZengDepartment of Epidemiology, School of Public Health, Guangxi Medical University, Nanning, Guangxi, China.
Hongping YuDepartment of Epidemiology, School of Public Health, Guilin Medical University, Guilin, Guangxi, China.
Anhua LiDepartment of Epidemiology, School of Public Health, Guangxi Medical University, Nanning, Guangxi, China.
Chunhua BeiDepartment of Epidemiology, School of Public Health, Guilin Medical University, Guilin, Guangxi, China.
Xiaoqiang QiuDepartment of Epidemiology, School of Public Health, Guangxi Medical University, Nanning, Guangxi, China.
Guangxi Medical University · CNGuilin Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The forkhead box O (FOXO) transcription factors play important roles in various cancer development including Hepatocellular Carcinoma (HCC). In this study we conducted a hospital-based case control study including 1049 cases (HCC patients) and 1052 controls (non-tumor patients) to examine whether single nucleotide polymorphisms (SNPs) within microRNA (miRNA) target sites of FOXO genes confer HCC susceptibility. A total of three miRNA target site SNPs in the 3' untranslated regions (UTR) of FOXO1 (rs17592236), FOXO3 (rs4946936) and FOXO4 (rs4503258) were analyzed. No statistically significant differences were found in genotype distribution for rs17592236, rs4946936, and rs4503258 between the HCC patient group and the tumor-free control group using single factor chi-square analysis (P>0.05). However, multivariate logistic regression analysis showed that the CT/TT genotype in rs17592236 was significantly associated with decreased risk of HCC development (P = 0.010, OR = 0.699, 95% CI: 0.526-0.927) as compared to the CC genotype in rs17592236. Additionally, a genetic interaction was found between rs17592236 and rs4503258 (P = 0.003, OR = 0.755, 95% CI: 0.628-0.908). Functional dual luciferase reporter assays verified that the rs17592236 SNP was a target site of human miRNA miR-137. Together, these results indicate that the rs17592236 polymorphism is associated with decreasing of HCC hereditary susceptibility likely through modulating the binding affinity of miR-137 to the 3'UTR in FOXO1 messenger RNA (mRNA). Further knowledge obtained from this study may provide important evidence for the prevention and targeted therapy of HCC.

Indexed as

Polymorphism, Single NucleotideCarcinoma, HepatocellularCase-Control StudiesEpistasis, GeneticForkhead Transcription FactorsGene-Environment InteractionGenetic Predisposition to DiseaseHEK293 CellsHumansLiver NeoplasmsMaleMicroRNAsMiddle AgedForkhead Transcription FactorsMicroRNAsMIRN137 microRNA, human

Identifiers

PMID25739100
PMCPMC4357486
OpenAlexW2157457841

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.