Evidence map›Paper›PMID 25738580›Full record

ArticlePLoS neglected tropical diseases2015

Diarrheagenic Escherichia coli carrying supplementary virulence genes are an important cause of moderate to severe diarrhoeal disease in Mexico.

Sandra Patzi-Vargas, Mussaret Bano Zaidi, Iza Perez-Martinez, Magda León-Cen, Alba Michel-Ayala, Damien Chaussabel, Teresa Estrada-Garcia

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 70 citations in OpenAlex.

  1. Pooled it
  2. EnteroaggregativeEcoSal Plus · 2025
    Review
  3. Association of DiarrheagenicMicroorganisms · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Adhesin related genes as potential markers for the enteroaggregativeFrontiers in cellular and infection microbiology · 2022
    Article
  8. Article
  9. A Novel Adult Murine Model of Typical EnteroaggregativeFrontiers in cellular and infection microbiology · 2022
    Article
  10. Article
  11. Prevalence of Cyclomodulin-PositivePathogens (Basel, Switzerland) · 2021
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. New Insights Into DAEC and EAEC Pathogenesis and Phylogeny.Frontiers in cellular and infection microbiology · 2020
    Article
  19. Pathotyping and Antibiotic Resistance Profiling ofBioMed research international · 2020
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Sandra Patzi-VargasDepartment of Molecular Biomedicine, CINVESTAV-IPN, México DF, México.
Mussaret Bano ZaidiMicrobiology Research Laboratory and Paediatric Emergency Department, Hospital General O'Horán, Mérida, Yucatán, México; Infectious Diseases Research Unit, Hospital Regional de Alta Especialidad de La Península de Yucatán, Mérida, Yucatán, México.
Iza Perez-MartinezDepartment of Molecular Biomedicine, CINVESTAV-IPN, México DF, México.
Magda León-CenMicrobiology Research Laboratory and Paediatric Emergency Department, Hospital General O'Horán, Mérida, Yucatán, México.
Alba Michel-AyalaMicrobiology Research Laboratory and Paediatric Emergency Department, Hospital General O'Horán, Mérida, Yucatán, México.
Damien ChaussabelDepartment of Systems Immunology, Benaroya Research Institute, Seattle, Washington, United States of America.
Teresa Estrada-GarciaDepartment of Molecular Biomedicine, CINVESTAV-IPN, México DF, México.
Center for Research and Advanced Studies of the National Polytechnic Institute · MXHospital General San Juan de Dios · GTBenaroya Research InstituteHospital Regional de Alta Especialidad del Bajío · MX

Funding

Blood Transcriptional Biomarker Profiles for Category B PathogensU01AI082110 · NIAID · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI LINSLEY, PETER S · 2009 to 2013
$6.3M
NIAID NIH HHS U01 AI082110NIAID NIH HHS U01AI082110
6 · The paper itself

Abstract

Diarrheagenic Escherichia coli (DEC) cause acute and persistent diarrhoea worldwide, but little is known about their epidemiology in Mexico. We determined the prevalence of bacterial enteropathogens in 831 children with acute diarrhoea over a four-year period in Yucatan, Mexico. Six DEC supplementary virulence genes (SVG), mainly associated with enteroaggregative E. coli (EAEC), were sought in 3100 E. coli isolates. DEC was the most common bacterial enteropathogen (28%), surpassing Salmonella (12%) and Shigella (9%). Predominant DEC groups were diffusely adherent E. coli (DAEC) (35%), EAEC (24%), and enteropathogenic E. coli (EPEC) (19%). Among children with DEC infections, 14% had severe illness mainly caused by EPEC (26%) and DAEC (18%); 30% had moderate diarrhoea mainly caused by DAEC (36%), mixed DEC infections (33%) and EAEC (32%). DAEC was most prevalent during spring, while ETEC, EAEC and EPEC predominated in summer. EAEC was more frequent in children 6-24 months old than in those younger than 6 months of age (P = 0.008, OR = 4.2, 95% CI, 1.3-13.9). The presence of SVG dispersin, (aatA), dispersin-translocator (aatA), enteroaggregative heat-stable toxin 1 (astA), plasmid encoded toxin (pet), cytolethal distending toxin (cdt) was higher in DEC than non-DEC strains, (36% vs 26%, P <0.0001, OR = 1.5, 95% CI, 1.3-1.8). 98% of EAEC-infected children harboured strains with SVG; 85% carried the aap-aatA gene combination, and 33% of these also carried astA. 28% of both EPEC and ETEC, and 6% of DAEC patients had strains with SVG. 54% of EPEC patients carried pet-positive strains alone or in combination with astA; only this DEC group harboured cdt-positive isolates. All ETEC patients carried astA- or astA-aap-positive strains. astA and aap were the most common SVG in DAEC (3% and 2%) and non-DEC strains (21% and 13%). DEC carrying SVG are an important cause of moderate to severe bacterial diarrhoea in Mexican children.

Indexed as

Child, PreschoolDiarrheaEscherichia coliEscherichia coli InfectionsFemaleHumansInfantMaleMexicoPrevalenceVirulence

Identifiers

PMID25738580
PMCPMC4349884
OpenAlexW2037340333

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.