Evidence map›Paper›PMID 25738547›Full record

ArticlePlant signaling & behavior2015

Gibberellin driven growth in elf3 mutants requires PIF4 and PIF5.

Julie Filo, Austin Wu, Erica Eliason, Timothy Richardson, Bryan C Thines, Frank G Harmon

Open access · bronzeAbstract read
In one paragraph

Article in Plant signaling & behavior, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
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  5. Overexpression of 9-International journal of molecular sciences · 2023
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  6. Review
  7. Review
  8. Article
  9. GIGANTEA gates gibberellin signaling through stabilization of the DELLA proteins inProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
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  11. Review
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  14. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Julie Filoa Keck Science Department ; Pitzer College ; Claremont , CA USA.
Austin Wu
Erica Eliason
Timothy Richardson
Bryan C Thines
Frank G Harmon
W.M. Keck Science Center · USBerkeley College · USClaremont Colleges · US

Funding

Circadian Gating of Signals by EARLY FLOWERING 3F32GM083536 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI THINES, BRYAN · 2008 to 2009
$97k
Howard Hughes Medical InstituteNIGMS NIH HHS F32GM083536-01
6 · The paper itself

Abstract

The regulatory connections between the circadian clock and hormone signaling are essential to understand, as these two regulatory processes work together to time growth processes relative to predictable environmental events. Gibberellins (GAs) are phytohormones that control many growth processes throughout all stages of the plant life cycle, including germination and flowering. An increasing number of examples demonstrate that the circadian clock directly influences GA biosynthesis and signaling. EARLY FLOWERING 3 (ELF3) participates in a tripartite transcriptional complex known as the Evening Complex (EC). In this capacity, ELF3 is fundamental to core circadian clock activity, as well as time-of-day specific regulation of genes directly responsible for growth control, namely the PHYTOCHROME INTERACTING FACTOR 4 (PIF4) and PIF5 genes. Here we show that the GA biosynthesis inhibitor paclobutrazol substantially reduces the long hypocotyl and petiole phenotypes of Arabidopsis elf3 mutants. In addition, loss of ELF3 activity causes upregulation of the key GA biosynthesis genes GA20ox1 and GA20ox2. Moreover, GA20ox1 and GA20ox2 expression depends strongly on the redundant activities of PIF4 and PIF5. These findings indicate that the defining growth phenotypes of elf3 mutants arise from altered GA biosynthesis due to misregulation of PIF4 and PIF5. These observations agree with recent work linking increased GA production with the elongated growth phenotypes of the barley elf3 mutant. Thus, the role of the EC in regulation of GA biosynthesis and signaling in eudicots is shared with monocots and, therefore, is a highly conserved mechanism for growth control.

Indexed as

Gene Expression Regulation, PlantPhotoperiodArabidopsisArabidopsis ProteinsBasic Helix-Loop-Helix ProteinsCircadian ClocksCircadian RhythmGenes, PlantGibberellinsHypocotylLightMutationPhenotypePlant DevelopmentPlant Growth RegulatorsPlant StemsArabidopsis ProteinsAt2g25930 protein, ArabidopsisBasic Helix-Loop-Helix ProteinsGibberellinsPIF4 protein, ArabidopsisPIF5 protein, ArabidopsisPlant Growth RegulatorsTranscription Factorscircadian clockCO, CONSTANSCol-0, Columbiaearly flowering 3EC, Evening ComplexELF3, EARLY FLOWERING 3ELF4, EARLY FLOWERING 4EMS, ethyl methanesulfonateFT, FLOWERING LOCUS TGA20ox, gibberellin 20-oxidaseGA3ox, gibberellin 3-oxidaseGA, gibberellingibberellinLD, long dayLUX, LUX ARRHYTHMOPAC, paclobutrazolphytochrome interacting factorphytohormonePIF4PIF - PHYTOCHROME INTERACTING FACTORplant growthqPCR, quantitative RT-PCRSD, short dayWT, wild typeZT, Zeitgeiber Time.

Identifiers

PMID25738547
PMCPMC4622946
OpenAlexW2053760100

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.