Evidence map›Paper›PMID 25737022›Full record

ArticleScientific reports2015

Improving prediction of prostate cancer recurrence using chemical imaging.

Jin Tae Kwak, André Kajdacsy-Balla, Virgilia Macias, Michael Walsh, Saurabh Sinha, Rohit Bhargava

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Trial
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  4. Review
  5. Article
  6. Digital Histopathology by Infrared Spectroscopic Imaging.Annual review of analytical chemistry (Palo Alto, Calif.) · 2023
    Review
  7. Article
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  9. Article
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  11. All-digital histopathology by infrared-optical hybrid microscopy.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  12. Article
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  19. Review
  20. Infrared spectroscopic imaging: Label-free biochemical analysis of stroma and tissue fibrosis.The international journal of biochemistry & cell biology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jin Tae Kwak1] Center for Interventional Oncology, National Institutes of Health, Bethesda, MD 20892, USA [2] Department of Computer Science, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA [3] Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
André Kajdacsy-BallaDepartment of Pathology, University of Illinois at Chicago, Chicago, IL 60612, USA.
Virgilia MaciasDepartment of Pathology, University of Illinois at Chicago, Chicago, IL 60612, USA.
Michael Walsh1] Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA [2] Department of Pathology, University of Illinois at Chicago, Chicago, IL 60612, USA.
Saurabh SinhaDepartment of Computer Science, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.
Rohit Bhargava1] Beckman Institute for Advanced Science and Technology, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA [2] Department of Bioengineering, Mechanical Science and Engineering, Electrical and Computer Engineering, Chemical and Biomolecular Engineering and University of Illinois Cancer Center, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

Funding

Infrared microscopy for a systems approach to prostate pathologyR01CA138882 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BHARGAVA, ROHIT · 2010 to 2014
$1.5M
NCI NIH HHS 1R01CA138882NCI NIH HHS R01 CA138882
6 · The paper itself

Abstract

Precise Outcome prediction is crucial to providing optimal cancer care across the spectrum of solid cancers. Clinically-useful tools to predict risk of adverse events (metastases, recurrence), however, remain deficient. Here, we report an approach to predict the risk of prostate cancer recurrence, at the time of initial diagnosis, using a combination of emerging chemical imaging, a diagnostic protocol that focuses simultaneously on the tumor and its microenvironment, and data analysis of frequent patterns in molecular expression. Fourier transform infrared (FT-IR) spectroscopic imaging was employed to record the structure and molecular content from tumors prostatectomy. We analyzed data from a patient cohort that is mid-grade dominant - which is the largest cohort of patients in the modern era and in whom prognostic methods are largely ineffective. Our approach outperforms the two widely used tools, Kattan nomogram and CAPRA-S score in a head-to-head comparison for predicting risk of recurrence. Importantly, the approach provides a histologic basis to the prediction that identifies chemical and morphologic features in the tumor microenvironment that is independent of conventional clinical information, opening the door to similar advances in other solid tumors.

Indexed as

Models, TheoreticalNeoplasm Recurrence, LocalAgedAlgorithmsHumansMaleMiddle AgedNeoplasm GradingNeoplasm StagingOutcome Assessment, Health CarePrognosisProstateProstatic NeoplasmsReproducibility of ResultsSensitivity and SpecificitySpectroscopy, Fourier Transform Infrared

Identifiers

PMID25737022
PMCPMC4348620

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.