Evidence map›Paper›PMID 25736269›Full record

ArticleAmerican journal of medical genetics. Part A2015

FBN1 contributing to familial congenital diaphragmatic hernia.

Tyler F Beck, Philippe M Campeau, Shalini N Jhangiani, Tomasz Gambin, Alexander H Li, Reem Abo-Zahrah, Valerie K Jordan, Andres Hernandez-Garcia, Wojciech K Wiszniewski, Donna Muzny and 6 more

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In one paragraph

Article in American journal of medical genetics. Part A, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Journal of pediatric genetics · 2024
    Article
  4. Article
  5. Review
  6. Review
  7. An omic approach to congenital diaphragmatic hernia: a pilot study of genomic, microRNA, and metabolomic profiling.Journal of perinatology : official journal of the California Perinatal Association · 2020
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Review
  15. Exome sequencing identifies de novo pathogenic variants inCold Spring Harbor molecular case studies · 2017
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Tyler F BeckDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas.
Philippe M Campeau
Shalini N Jhangiani
Tomasz Gambin
Alexander H Li
Reem Abo-Zahrah
Valerie K Jordan
Andres Hernandez-Garcia
Wojciech K Wiszniewski
Donna Muzny
Richard A Gibbs
Eric Boerwinkle
James R Lupski
Brendan Lee
Willie Reardon
Daryl A Scott
Baylor College of Medicine · USThe University of Texas Health Science Center at Houston · USChildren's Health Ireland at Crumlin · IEHoward Hughes Medical Institute · US

Funding

Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
Baylor-Johns Hopkins Center for Mendelian GeneticsU54HG006542 · NHGRI · JOHNS HOPKINS UNIVERSITY · PI VALLE, DAVID · 2012 to 2015
$15.6M
Initiative for Maximizing Student Development (IMSD) ProgramR25GM056929 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI PEREIRA, FRED A · 1998 to 2023
$12.4M
Retinoid-Related Genes in Diaphragm and Cardiac DevelopmentR01HD064667 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI SCOTT, DARYL ARMSTRONG · 2010 to 2014
$1.5M
NHGRI NIH HHS U54 HG006542NHGRI NIH HHS U54HG006542NICHD NIH HHS R01 HD064667NIDDK NIH HHS P30 DK056338NIGMS NIH HHS R25 GM056929NIGMS NIH HHS R25 GM056929-16
6 · The paper itself

Abstract

Congenital diaphragmatic hernia (CDH) is a relatively common, life--threatening birth defect. We present a family with recurrent CDH--paraesophageal and central--for whom exome sequencing (ES) revealed a frameshift mutation (c.4969_4970insA, p.Ile1657Asnfs*30) in the fibrillin 1 gene (FBN1) that causes Marfan syndrome. A diagnosis of Marfan syndrome had not been considered previously in this family. However, a review of the literature demonstrated that FBN1 mutations have an unusual pattern of CDH in which paraesophageal hernias are particularly common. Subsequent clinical evaluations revealed evidence for ectopia lentis in affected family members supporting a clinical diagnosis of Marfan syndrome. Since only two other cases of familial CDH have been described in association with FBN1 mutations, we investigated an oligogenic hypothesis by examining ES data for deleterious sequence changes in other CDH-related genes. This search revealed putatively deleterious sequence changes in four other genes that have been shown to cause diaphragm defects in humans and/or mice--FREM1, DES, PAX3 and MET. It is unclear whether these changes, alone or in aggregate, are contributing to the development of CDH in this family. However, their individual contribution is likely to be small compared to that of the frameshift mutation in FBN1. We conclude that ES can be used to identify both major and minor genetic factors that may contribute to CDH. These results also suggest that ES should be considered in the diagnostic evaluation of individuals and families with CDH, particularly when other diagnostic modalities have failed to reveal a molecular etiology.

Indexed as

AdipokinesAdultChild, PreschoolDNA Mutational AnalysisExomeFemaleFibrillin-1FibrillinsFrameshift MutationGenetic Association StudiesHernias, Diaphragmatic, CongenitalHumansMaleMarfan SyndromeMicrofilament ProteinsPedigreeAdipokinesFBN1 protein, humanFbn1 protein, mouseFibrillin-1FibrillinsMicrofilament Proteinscongenital diaphragmatic herniaDESexome sequencingFBN1Marfan syndromeMEToligogenic inheritancePAX3

Identifiers

PMID25736269
PMCPMC4522925
OpenAlexW2145215854

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.