Evidence map›Paper›PMID 25733713›Full record

ArticleThe Journal of cell biology2015

DNA2 drives processing and restart of reversed replication forks in human cells.

Saravanabhavan Thangavel, Matteo Berti, Maryna Levikova, Cosimo Pinto, Shivasankari Gomathinayagam, Marko Vujanovic, Ralph Zellweger, Hayley Moore, Eu Han Lee, Eric A Hendrickson and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 242 papers.

0numbers the graph read from it
0cells of the map it votes in
242citing papers in PubMed
18.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

242 citing papers in PubMed, 334 citations in OpenAlex.

  1. Article
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  5. Heterogeneous CRISPR/Cas9 Editing ofInternational journal of molecular sciences · 2026
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182 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Saravanabhavan ThangavelDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104.
Matteo BertiDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104.
Maryna LevikovaInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Cosimo PintoInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Shivasankari GomathinayagamDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104.
Marko VujanovicInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Ralph ZellwegerInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Hayley MooreDepartment of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110.
Eu Han LeeDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455.
Eric A HendricksonDepartment of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota, Minneapolis, MN 55455.
Petr CejkaInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Sheila StewartDepartment of Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110.
Massimo LopesInstitute of Molecular Cancer Research, University of Zurich, CH-8057 Zurich, Switzerland.
Alessandro VindigniDepartment of Biochemistry and Molecular Biology, Saint Louis University School of Medicine, St. Louis, MO 63104 avindign@slu.edu.
University of Zurich · CHSaint Louis University · USUniversity of Minnesota · USWashington University in St. Louis · US

Funding

MOLECULAR ONCOLOGY TRAINING GRANTT32CA113275 · NCI · WASHINGTON UNIVERSITY · PI Matthew J Walter · 2006 to 2026
$5.7M
The mechanism of Cas9/CRISPR-initiated genome modification in human somatic cellsR01GM088351 · NIGMS · UNIVERSITY OF MINNESOTA · PI HENDRICKSON, ERIC A · 2010 to 2018
$2.3M
New Mechanisms of Replication Stress ResponseR01GM108648 · NIGMS · SAINT LOUIS UNIVERSITY · PI VINDIGNI, ALESSANDRO · 2014 to 2018
$1.4M
NCI NIH HHS CA15446NCI NIH HHS T32 CA113275NIGMS NIH HHS GM0088351NIGMS NIH HHS R01 GM088351NIGMS NIH HHS R01 GM108648NIGMS NIH HHS R01GM108648
6 · The paper itself

Abstract

Accurate processing of stalled or damaged DNA replication forks is paramount to genomic integrity and recent work points to replication fork reversal and restart as a central mechanism to ensuring high-fidelity DNA replication. Here, we identify a novel DNA2- and WRN-dependent mechanism of reversed replication fork processing and restart after prolonged genotoxic stress. The human DNA2 nuclease and WRN ATPase activities functionally interact to degrade reversed replication forks with a 5'-to-3' polarity and promote replication restart, thus preventing aberrant processing of unresolved replication intermediates. Unexpectedly, EXO1, MRE11, and CtIP are not involved in the same mechanism of reversed fork processing, whereas human RECQ1 limits DNA2 activity by preventing extensive nascent strand degradation. RAD51 depletion antagonizes this mechanism, presumably by preventing reversed fork formation. These studies define a new mechanism for maintaining genome integrity tightly controlled by specific nucleolytic activities and central homologous recombination factors.

Indexed as

Carrier ProteinsCell LineDNA-Binding ProteinsDNA HelicasesDNA Repair EnzymesDNA ReplicationEndodeoxyribonucleasesExodeoxyribonucleasesHumansMRE11 Homologue ProteinNuclear ProteinsRad51 RecombinaseRecQ HelicasesWerner Syndrome HelicaseCarrier ProteinsDNA2 protein, humanDNA-Binding ProteinsDNA HelicasesDNA Repair EnzymesEndodeoxyribonucleasesEXO1 protein, humanExodeoxyribonucleasesMRE11 Homologue ProteinMRE11 protein, humanNuclear ProteinsRAD51 protein, humanRad51 RecombinaseRBBP8 protein, humanRecQ HelicasesRECQL protein, humanWerner Syndrome HelicaseWRN protein, human

Identifiers

PMID25733713
PMCPMC4347643
OpenAlexW1989388273

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.