Evidence map›Paper›PMID 25733664›Full record

ArticleThe Journal of biological chemistry2015

Role of Conserved Proline Residues in Human Apolipoprotein A-IV Structure and Function.

Xiaodi Deng, Ryan G Walker, Jamie Morris, W Sean Davidson, Thomas B Thompson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The Variants atFrontiers in molecular biosciences · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Xiaodi DengFrom the Departments of Molecular Genetics, Biochemistry and Microbiology and.
Ryan G WalkerFrom the Departments of Molecular Genetics, Biochemistry and Microbiology and.
Jamie MorrisPathology and Laboratory Medicine, University of Cincinnati, Cincinnati, Ohio 45237.
W Sean DavidsonPathology and Laboratory Medicine, University of Cincinnati, Cincinnati, Ohio 45237 Sean.Davidson@UC.edu.
Thomas B ThompsonFrom the Departments of Molecular Genetics, Biochemistry and Microbiology and Tom.Thompson@uc.edu.
Laboratory of Molecular Genetics · PLUniversity of Cincinnati · US

Funding

TRAINING IN CARDIOVASCULAR BIOLOGYT32HL007382 · NHLBI · UNIVERSITY OF CINCINNATI · PI SCHWARTZ, ARNOLD · 1985 to 2012
$5.9M
Apolipoprotein A-I structure in high density lipoproteinsR01HL067093 · NHLBI · UNIVERSITY OF CINCINNATI · PI DAVIDSON, W SEAN · 2002 to 2016
$4.3M
The roles of apolipoprotein A-IV structure and lipid affinity in its functionR01HL082734 · NHLBI · UNIVERSITY OF CINCINNATI · PI DAVIDSON, W SEAN · 2006 to 2009
$1.2M
A high-resolution structural approach to understanding HDL biogenesisR01GM098458 · NIGMS · UNIVERSITY OF CINCINNATI · PI DAVIDSON, W SEAN · 2011 to 2014
$1.2M
NHLBI NIH HHS R01 HL067093NHLBI NIH HHS R01 HL082734NHLBI NIH HHS R01 HL67093NHLBI NIH HHS T32 HL007382NIGMS NIH HHS R01 GM098458
6 · The paper itself

Abstract

Apolipoprotein (apo)A-IV is a lipid emulsifying protein linked to a range of protective roles in obesity, diabetes, and cardiovascular disease. It exists in several states in plasma including lipid-bound in HDL and chylomicrons and as monomeric and dimeric lipid-free/poor forms. Our recent x-ray crystal structure of the central domain of apoA-IV shows that it adopts an elongated helical structure that dimerizes via two long reciprocating helices. A striking feature is the alignment of conserved proline residues across the dimer interface. We speculated that this plays important roles in the structure of the lipid-free protein and its ability to bind lipid. Here we show that the systematic conversion of these prolines to alanine increased the thermodynamic stability of apoA-IV and its propensity to oligomerize. Despite the structural stabilization, we noted an increase in the ability to bind and reorganize lipids and to promote cholesterol efflux from cells. The novel properties of these mutants allowed us to isolate the first trimeric form of an exchangeable apolipoprotein and characterize it by small-angle x-ray scattering and chemical cross-linking. The results suggest that the reciprocating helix interaction is a common feature of all apoA-IV oligomers. We propose a model of how self-association of apoA-IV can result in spherical lipoprotein particles, a model that may have broader applications to other exchangeable apolipoprotein family members.

Indexed as

AlanineAmino Acid SubstitutionApolipoproteins ACholesterolConserved SequenceHumansLiposomesModels, MolecularMutagenesis, Site-DirectedProlineProtein BindingProtein MultimerizationProtein StabilityProtein Structure, QuaternaryProtein Structure, SecondaryRecombinant ProteinsAlanineapolipoprotein A-IVApolipoproteins ACholesterolLiposomesProlineRecombinant ProteinsApolipoproteinApolipoprotein A-IVLipid BindingLipid-binding ProteinLipid-freeMass Spectrometry (MS)MutagenesisOligomerizationProtein Cross-linkingSelf-associationSmall Angle X-ray ScatteringStructure

Identifiers

PMID25733664
PMCPMC4409236
OpenAlexW1992518463

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.