Evidence map›Paper›PMID 25733517›Full record

ArticleInfection and immunity2015

Sequence elements upstream of the core promoter are necessary for full transcription of the capsule gene operon in Streptococcus pneumoniae strain D39.

Zhensong Wen, Odeniel Sertil, Yongxin Cheng, Shanshan Zhang, Xue Liu, Wen-Ching Wang, Jing-Ren Zhang

Open access · bronzeAbstract read
In one paragraph

Article in Infection and immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Zhensong WenCenter for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing, China.
Odeniel SertilCenter for Immunology and Microbial Disease, Albany Medical College, Albany, New York, USA.
Yongxin ChengCenter for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing, China.
Shanshan ZhangCenter for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing, China.
Xue LiuCenter for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing, China.
Wen-Ching WangBiomedical Science and Engineering Center, Institute of Molecular and Cellular Biology, National Tsing Hua University, Hsinchu, Taiwan.
Jing-Ren ZhangCenter for Infectious Disease Research, School of Medicine, Tsinghua University, Beijing, China Collaborative Innovation Center for Biotherapy, Tsinghua University, Beijing, China Collaborative Innovation Center for Biotherapy, State Key Laboratory of Biotherapy and Center, West China Hospital, West China Medical School, Sichuan University, Chengdu, China zhanglab@tsinghua.edu.cn.
Tsinghua University · CNAlbany Medical Center Hospital · USNational Tsing Hua University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Streptococcus pneumoniae is a major bacterial pathogen in humans. Its polysaccharide capsule is a key virulence factor that promotes bacterial evasion of human phagocytic killing. While S. pneumoniae produces at least 94 antigenically different types of capsule, the genes for biosynthesis of almost all capsular types are arranged in the same locus. The transcription of the capsular polysaccharide (cps) locus is not well understood. This study determined the transcriptional features of the cps locus in the type 2 virulent strain D39. The initial analysis revealed that the cps genes are cotranscribed from a major transcription start site at the -25 nucleotide (G) upstream of cps2A, the first gene in the locus. Using unmarked chromosomal truncations and a luciferase-based transcriptional reporter, we showed that the full transcription of the cps genes not only depends on the core promoter immediately upstream of cps2A, but also requires additional elements upstream of the core promoter, particularly a 59-bp sequence immediately upstream of the core promoter. Unmarked deletions of these promoter elements in the D39 genome also led to significant reduction in CPS production and virulence in mice. Lastly, common cps gene (cps2ABCD) mutants did not show significant abnormality in cps transcription, although they produced significantly less CPS, indicating that the CpsABCD proteins are involved in the encapsulation of S. pneumoniae in a posttranscriptional manner. This study has yielded important information on the transcriptional characteristics of the cps locus in S. pneumoniae.

Indexed as

Gene Expression Regulation, BacterialOperonRegulatory Sequences, Nucleic AcidTranscription, GeneticAnimalsBacterial CapsulesDisease Models, AnimalFemaleMembrane ProteinsMicePneumococcal InfectionsStreptococcus pneumoniaeVirulenceVirulence Factorscore protein, mouseMembrane ProteinsVirulence Factors

Identifiers

PMID25733517
PMCPMC4399061
OpenAlexW2106076358

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.