Evidence map›Paper›PMID 25732819›Full record

ArticleCell reports2015

Identification of a family of fatty-acid-speciated sonic hedgehog proteins, whose members display differential biological properties.

Jun Long, Robert Tokhunts, William M Old, Stephane Houel, Jezabel Rodgriguez-Blanco, Samer Singh, Neal Schilling, Anthony J Capobianco, Natalie G Ahn, David J Robbins

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Regulatory mechanisms of cytoneme-based morphogen transport.Cellular and molecular life sciences : CMLS · 2022
    Review
  4. Article
  5. Article
  6. Review
  7. Hedgehog Signal and Genetic Disorders.Frontiers in genetics · 2019
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. RNA-seq reveals conservation of function among the yolk sacs of human, mouse, and chicken.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Jun Long *Molecular Oncology Program, The DeWitt Daughtry Family Department of Surgery, University of Miami Miller School of Medicine, Miami, Florida 33136.
Robert Tokhunts *Molecular Oncology Program, The DeWitt Daughtry Family Department of Surgery, University of Miami Miller School of Medicine, Miami, Florida 33136.
William M Old *Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder, Colorado 80309.
Stephane HouelDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309.
Jezabel Rodgriguez-BlancoMolecular Oncology Program, The DeWitt Daughtry Family Department of Surgery, University of Miami Miller School of Medicine, Miami, Florida 33136.
Samer SinghMolecular Oncology Program, The DeWitt Daughtry Family Department of Surgery, University of Miami Miller School of Medicine, Miami, Florida 33136.
Neal SchillingMolecular Oncology Program, The DeWitt Daughtry Family Department of Surgery, University of Miami Miller School of Medicine, Miami, Florida 33136.
Anthony J CapobiancoMolecular Oncology Program, The DeWitt Daughtry Family Department of Surgery, University of Miami Miller School of Medicine, Miami, Florida 33136.
Natalie G AhnDepartment of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309.
David J RobbinsMolecular Oncology Program, The DeWitt Daughtry Family Department of Surgery, University of Miami Miller School of Medicine, Miami, Florida 33136.
Molecular Oncology (United States) · USUniversity of Colorado Boulder · USSylvester Comprehensive Cancer Center · USUniversity of Miami · US

Funding

Colorado Clinical and Translational Sciences InstituteUL1TR001082 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2013 to 2017
$48.0M
Colorado Clinical and Translational Science Institute (UL1)UL1TR000154 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2012 to 2013
$20.4M
Characterization of Sonic Hedgehog BiogenesisR01GM064011 · NIGMS · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI ROBBINS, DAVID J · 2002 to 2011
$2.6M
A New Model of Peptide Fragmentation for Improved Protein Identification and TargR01CA155453 · NCI · UNIVERSITY OF COLORADO · PI OLD, WILLIAM MARLAND · 2011 to 2015
$1.5M
Signal Transduction Pathways in MelanomaR01CA118972 · NCI · UNIVERSITY OF COLORADO · PI AHN, NATALIE G. · 2007 to 2011
$1.3M
Characterization of Sonic Hedgehog BiogenesisR56GM064011 · NIGMS · DARTMOUTH COLLEGE · PI ROBBINS, DAVID J · 2007 to 2007
$327k
NCATS NIH HHS UL1 TR000154NCATS NIH HHS UL1 TR001082NCI NIH HHS CA118972NCI NIH HHS CA155453NCI NIH HHS R01 CA118972NCI NIH HHS R01 CA155453NIGMS NIH HHS GM64011NIGMS NIH HHS R01 GM064011NIGMS NIH HHS R56 GM064011
6 · The paper itself

Abstract

Hedgehog (HH) proteins are proteolytically processed into a biologically active form that is covalently modified by cholesterol and palmitate. However, most studies of HH biogenesis have characterized protein from cells in which HH is overexpressed. We purified Sonic Hedgehog (SHH) from cells expressing physiologically relevant levels and showed that it was more potent than SHH isolated from overexpressing cells. Furthermore, the SHH in our preparations was modified with a diverse spectrum of fatty acids on its amino termini, and this spectrum of fatty acids varied dramatically depending on the growth conditions of the cells. The fatty acid composition of SHH affected its trafficking to lipid rafts as well as its potency. Our results suggest that HH proteins exist as a family of diverse lipid-speciated proteins that might be altered in different physiological and pathological contexts in order to regulate distinct properties of HH proteins.

Indexed as

AnimalsCell LineChick EmbryoChickensChromatography, High Pressure LiquidFatty AcidsHedgehog ProteinsHumansPeptidesTandem Mass SpectrometryFatty AcidsHedgehog ProteinsPeptides

Identifiers

PMID25732819
PMCPMC4350664
OpenAlexW2155849501

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.