Evidence map›Paper›PMID 25732065›Full record

ArticleCell host & microbe2015

A genome-scale vector resource enables high-throughput reverse genetic screening in a malaria parasite.

Ana Rita Gomes, Ellen Bushell, Frank Schwach, Gareth Girling, Burcu Anar, Michael A Quail, Colin Herd, Claudia Pfander, Katarzyna Modrzynska, Julian C Rayner and 1 more

Abstract read
In one paragraph

Article in Cell host & microbe, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed.

  1. Article
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  3. Bio-protocol · 2026
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  6. Review
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  10. Microtubule inner proteins ofProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  16. Review
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  19. IntracellularProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  20. Article

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Ana Rita GomesWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Ellen BushellWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Frank SchwachWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Gareth GirlingWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Burcu AnarWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Michael A QuailWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Colin HerdWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Claudia PfanderWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Katarzyna ModrzynskaWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK.
Julian C RaynerWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK. Electronic address: julian.rayner@sanger.ac.uk.
Oliver BillkerWellcome Trust Sanger Institute, Hinxton Cambridge CB10 1SA, UK. Electronic address: oliver.billker@sanger.ac.uk.

Funding

Medical Research Council G0501670Wellcome TrustWellcome Trust 098051
6 · The paper itself

Abstract

The genome-wide identification of gene functions in malaria parasites is hampered by a lack of reverse genetic screening methods. We present a large-scale resource of barcoded vectors with long homology arms for effective modification of the Plasmodium berghei genome. Cotransfecting dozens of vectors into the haploid blood stages creates complex pools of barcoded mutants, whose competitive fitness can be measured during infection of a single mouse using barcode sequencing (barseq). To validate the utility of this resource, we rescreen the P. berghei kinome, using published kinome screens for comparison. We find that several protein kinases function redundantly in asexual blood stages and confirm the targetability of kinases cdpk1, gsk3, tkl3, and PBANKA_082960 by genotyping cloned mutants. Thus, parallel phenotyping of barcoded mutants unlocks the power of reverse genetic screening for a malaria parasite and will enable the systematic identification of genes essential for in vivo parasite growth and transmission.

Indexed as

Genetic VectorsAnimalsGenetics, MicrobialGenetic TestingMalariaMicePlasmodium bergheiProtein KinasesReverse GeneticsProtein Kinases

Identifiers

PMID25732065
PMCPMC4362957

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.