Evidence map›Paper›PMID 25730776›Full record

ArticleNature structural & molecular biology2015

Microprocessor mediates transcriptional termination of long noncoding RNA transcripts hosting microRNAs.

Ashish Dhir, Somdutta Dhir, Nick J Proudfoot, Catherine L Jopling

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
92citing papers in PubMed, 1 pooled it
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

92 citing papers in PubMed, 1 synthesis or guideline pooled it, 142 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Metamorphosis and lncRNAs: A Close Relationship.Genesis (New York, N.Y. : 2000) · 2026
    Review
  6. Article
  7. Non-coding RNAs in alcohol-associated liver disease.Liver research (Beijing, China) · 2025
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Genome-Wide Transcriptional Response of Avocado toPlants (Basel, Switzerland) · 2024
    Article
  14. TheProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. A long noncoding RNA at theProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Article
  18. Review
  19. Article
  20. Review

32 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ashish DhirSir William Dunn School of Pathology, University of Oxford, Oxford, UK.
Somdutta DhirSir William Dunn School of Pathology, University of Oxford, Oxford, UK.
Nick J ProudfootSir William Dunn School of Pathology, University of Oxford, Oxford, UK.
Catherine L JoplingSchool of Pharmacy, University of Nottingham, Nottingham, UK.
University of Oxford · GBUniversity of Nottingham · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F02360X/1European Research Council 339270Wellcome Trust 091805Wellcome Trust 091805/Z/10/Z
6 · The paper itself

Abstract

MicroRNAs (miRNAs) play a major part in the post-transcriptional regulation of gene expression. Mammalian miRNA biogenesis begins with cotranscriptional cleavage of RNA polymerase II (Pol II) transcripts by the Microprocessor complex. Although most miRNAs are located within introns of protein-coding transcripts, a substantial minority of miRNAs originate from long noncoding (lnc) RNAs, for which transcript processing is largely uncharacterized. We show, by detailed characterization of liver-specific lnc-pri-miR-122 and genome-wide analysis in human cell lines, that most lncRNA transcripts containing miRNAs (lnc-pri-miRNAs) do not use the canonical cleavage-and-polyadenylation pathway but instead use Microprocessor cleavage to terminate transcription. Microprocessor inactivation leads to extensive transcriptional readthrough of lnc-pri-miRNA and transcriptional interference with downstream genes. Consequently we define a new RNase III-mediated, polyadenylation-independent mechanism of Pol II transcription termination in mammalian cells.

Indexed as

Models, GeneticRNA Processing, Post-TranscriptionalTranscription, GeneticGene Expression RegulationHeLa CellsHumansMicroRNAsRNA, Long NoncodingMicroRNAsMIRN122 microRNA, humanRNA, Long Noncoding

Identifiers

PMID25730776
PMCPMC4492989
OpenAlexW2022959432

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.