Evidence map›Paper›PMID 25727148›Full record

ReviewAdvances in cancer research2015

The detection and discovery of glycan motifs in biological samples using lectins and antibodies: new methods and opportunities.

Huiyuan Tang, Peter Hsueh, Doron Kletter, Marshall Bern, Brian Haab

Open access · greenAbstract readReview
In one paragraph

Review in Advances in cancer research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
11.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. In SituCancers · 2022
    Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Chemical Glycoproteomics.Chemical reviews · 2016
    Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Huiyuan TangVan Andel Research Institute, Grand Rapids, MI, USA.
Peter HsuehVan Andel Research Institute, Grand Rapids, MI, USA.
Doron KletterProtein Metrics, San Carlos, CA, USA.
Marshall BernProtein Metrics, San Carlos, CA, USA.
Brian HaabVan Andel Research Institute, Grand Rapids, MI, USA. Electronic address: brian.haab@vai.org.
Van Andel Institute · US

Funding

Detection of Pre-Invasive Pancreatic Cysts Using Protein and Glycan BiomarkersU01CA152653 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI ALLEN, PETER J, BRAND, RANDALL · 2010 to 2021
$5.8M
Targeted Glycomics and Affinity Reagents for Cancer Biomarker DevelopmentU01CA168896 · NCI · VAN ANDEL RESEARCH INSTITUTE · PI HAAB, BRIAN B. · 2012 to 2016
$2.3M
Comprehensive Glycoproteomic Tool Development for Cancer BiomarkersR41GM112750 · NIGMS · PROTEIN METRICS, LLC · PI BECKER, CHRISTOPHER H, HAAB, BRIAN B. · 2014 to 2015
$686k
NCI NIH HHS U01 CA152653NCI NIH HHS U01 CA168896NIGMS NIH HHS R41 GM112750
6 · The paper itself

Abstract

Recent research has uncovered unexpected ways that glycans contribute to biology, as well as new strategies for combatting disease using approaches involving glycans. To make full use of glycans for clinical applications, we need more detailed information on the location, nature, and dynamics of glycan expression in vivo. Such studies require the use of specimens acquired directly from patients. Effective studies of clinical specimens require low-volume assays, high precision measurements, and the ability to process many samples. Assays using affinity reagents-lectins and glycan-binding antibodies-can meet these requirements, but further developments are needed to make the methods routine and effective. Recent advances in the use of glycan-binding proteins involve improved determination of specificity using glycan arrays; the availability of databases for mining and analyzing glycan array data; lectin engineering methods; and the ability to quantitatively interpret lectin measurements. Here, we describe many of the challenges and opportunities involved in the application of these new approaches to the study of biological samples. The new tools hold promise for developing methods to improve the outcomes of patients afflicted with diseases characterized by aberrant glycan expression.

Indexed as

AntibodiesBinding SitesBiomarkersCarrier ProteinsGlycoproteinsHumansLectinsNeoplasmsPolysaccharidesProtein Array AnalysisAntibodiesBiomarkersCarrier ProteinsGlycoproteinsLectinsPolysaccharidesAntibody–lectin sandwich arraysGlycan arraysGlycan-binding proteinsGlycansGlycoSearchLectins

Identifiers

PMID25727148
PMCPMC4484597
OpenAlexW1600458637

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.